BLASTX nr result

ID: Coptis25_contig00032173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032173
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305182.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
gb|EEE54660.1| hypothetical protein OsJ_01944 [Oryza sativa Japo...   107   8e-22
gb|EEC70725.1| hypothetical protein OsI_02109 [Oryza sativa Indi...   107   8e-22
gb|ABK93752.1| unknown [Populus trichocarpa]                          107   1e-21
ref|XP_002302993.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002305182.1| predicted protein [Populus trichocarpa] gi|222848146|gb|EEE85693.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  111 bits (277), Expect = 7e-23
 Identities = 58/87 (66%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
 Frame = +1

Query: 127 RGNAETLKTRSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRH 300
           R   E LK +S   A E S   D    ILKCKSVYKCRICPRI+CLTEE++R+HL+SKRH
Sbjct: 78  RTGIEILKKQSNATADEESLPDDIPDCILKCKSVYKCRICPRIICLTEETMRAHLSSKRH 137

Query: 301 ARSEKLLKEGRLKFMLNSDGEIEEDQE 381
           ARSEKL+KE RLK MLNSDGEIE   E
Sbjct: 138 ARSEKLMKENRLKVMLNSDGEIENLDE 164


>gb|EEE54660.1| hypothetical protein OsJ_01944 [Oryza sativa Japonica Group]
          Length = 262

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = +1

Query: 115 RSSGRGNAETLKTRSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLN 288
           + +  G A++ K  S     +++ E D+  +ILKCKSVYKC++CPRI+CL EE +R HL 
Sbjct: 117 KRASSGKADSTKDASDT---DDALEVDFNNYILKCKSVYKCKLCPRIICLNEEMVRVHLK 173

Query: 289 SKRHARSEKLLKEGRLKFMLNSDGEIEEDQE 381
           SKRHARS+KLL EGRLK MLNSDGE+EE+QE
Sbjct: 174 SKRHARSKKLLGEGRLKLMLNSDGELEEEQE 204


>gb|EEC70725.1| hypothetical protein OsI_02109 [Oryza sativa Indica Group]
          Length = 262

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/91 (58%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
 Frame = +1

Query: 115 RSSGRGNAETLKTRSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLN 288
           + +  G A++ K  S     +++ E D+  +ILKCKSVYKC++CPRI+CL EE +R HL 
Sbjct: 117 KRASSGKADSTKDASDT---DDALEVDFNNYILKCKSVYKCKLCPRIICLNEEMVRVHLK 173

Query: 289 SKRHARSEKLLKEGRLKFMLNSDGEIEEDQE 381
           SKRHARS+KLL EGRLK MLNSDGE+EE+QE
Sbjct: 174 SKRHARSKKLLGEGRLKLMLNSDGELEEEQE 204


>gb|ABK93752.1| unknown [Populus trichocarpa]
          Length = 247

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/81 (67%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
 Frame = +1

Query: 148 KTRSKKLAKENSSEADY--FILKCKSVYKCRICPRIVCLTEESLRSHLNSKRHARSEKLL 321
           K +S  +A + S   D    ILKCKSVYKCRICPRI+CLTEE++R+HLNSKRH+RS+KL+
Sbjct: 106 KKQSNIMANKESVPDDIQDCILKCKSVYKCRICPRIICLTEETMRAHLNSKRHSRSKKLM 165

Query: 322 KEGRLKFMLNSDGEIEE-DQE 381
           KE RLK MLNSDGEIE  DQE
Sbjct: 166 KENRLKVMLNSDGEIENMDQE 186


>ref|XP_002302993.1| predicted protein [Populus trichocarpa] gi|222844719|gb|EEE82266.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/61 (81%), Positives = 57/61 (93%), Gaps = 1/61 (1%)
 Frame = +1

Query: 202 ILKCKSVYKCRICPRIVCLTEESLRSHLNSKRHARSEKLLKEGRLKFMLNSDGEIEE-DQ 378
           ILKCKSVYKCRICPRI+CLTEE++R+HLNSKRH+RS+KL+KE RLK MLNSDGEIE  DQ
Sbjct: 127 ILKCKSVYKCRICPRIICLTEETMRAHLNSKRHSRSKKLMKENRLKVMLNSDGEIENMDQ 186

Query: 379 E 381
           E
Sbjct: 187 E 187


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