BLASTX nr result

ID: Coptis25_contig00032151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032151
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532027.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002532027.1| conserved hypothetical protein [Ricinus communis]
           gi|223528297|gb|EEF30343.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/73 (36%), Positives = 45/73 (61%)
 Frame = -2

Query: 228 FVRAIFTMSGISKLNWEERRAFMRNLGFSHAESLSMFKRQPCIFVLSKENMQSRVEFFTV 49
           F+ A+ +M+ IS+ +WE +R F+ + G+S +E L  F+ QP   + S++ M+  +EFF  
Sbjct: 146 FIYALQSMAVISRSHWERKREFLMSFGWSESEFLLAFRLQPFFMLTSEKKMKVLMEFFLT 205

Query: 48  KQNFELSDIAKNP 10
           K   + SDI K P
Sbjct: 206 KLCLQPSDIVKCP 218


Top