BLASTX nr result

ID: Coptis25_contig00032125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032125
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34156.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...    81   8e-14
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]    81   8e-14
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    81   1e-13
ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13

>emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +1

Query: 52  VQSSVVTLNILINCYCHLGRPELCFAVFSNILKLGFEPDAITFTTLLKGLSLHGKLAEAV 231
           V  +V TLNILIN +CHL R    F+V + ILKLG +PD  TFTTL++GL + GK+ EA+
Sbjct: 76  VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 135

Query: 232 ELLHKIVDNGY 264
            L  K++D G+
Sbjct: 136 HLFDKMIDEGF 146


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +1

Query: 52  VQSSVVTLNILINCYCHLGRPELCFAVFSNILKLGFEPDAITFTTLLKGLSLHGKLAEAV 231
           V  +V TLNILIN +CHL R    F+V + ILKLG +PD  TFTTL++GL + GK+ EA+
Sbjct: 87  VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 146

Query: 232 ELLHKIVDNGY 264
            L  K++D G+
Sbjct: 147 HLFDKMIDEGF 157


>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +1

Query: 52  VQSSVVTLNILINCYCHLGRPELCFAVFSNILKLGFEPDAITFTTLLKGLSLHGKLAEAV 231
           V  +V TLNILIN +CHL R    F+V + ILKLG +PD  TFTTL++GL + GK+ EA+
Sbjct: 96  VPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 155

Query: 232 ELLHKIVDNGY 264
            L  K++D G+
Sbjct: 156 HLFDKMIDEGF 166


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 35/71 (49%), Positives = 49/71 (69%)
 Frame = +1

Query: 52  VQSSVVTLNILINCYCHLGRPELCFAVFSNILKLGFEPDAITFTTLLKGLSLHGKLAEAV 231
           +   V TLNILIN +CHL RP   F+V + ILKLG +PD  TFTTL++GL + GK+ +A+
Sbjct: 98  IPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDAL 157

Query: 232 ELLHKIVDNGY 264
            L  K++  G+
Sbjct: 158 HLFDKMIGEGF 168


>ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/71 (49%), Positives = 52/71 (73%)
 Frame = +1

Query: 52  VQSSVVTLNILINCYCHLGRPELCFAVFSNILKLGFEPDAITFTTLLKGLSLHGKLAEAV 231
           ++ ++VTLNILINC+CHLG+    F+V   ILKLG++P+ IT TTL+KGL L G++ ++V
Sbjct: 83  IEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSV 142

Query: 232 ELLHKIVDNGY 264
               K+V  G+
Sbjct: 143 HFHDKVVAQGF 153


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