BLASTX nr result

ID: Coptis25_contig00032120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032120
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309840.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002515717.1| ATP binding protein, putative [Ricinus commu...    58   7e-07
ref|XP_002274577.2| PREDICTED: cysteine-rich receptor-like prote...    55   4e-06

>ref|XP_002309840.1| predicted protein [Populus trichocarpa] gi|222852743|gb|EEE90290.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = +2

Query: 155 CNTAFNYTPNTPFATNLNLTLGSLAANVSLNGFYYTTEGTTADRVYGLLQC 307
           C+ + NYT  + +  NLNLTL SLAAN SL G+Y +T G   + VYGL+ C
Sbjct: 2   CDNSMNYTSGSAYQQNLNLTLTSLAANASLTGYYISTVGQNPNLVYGLINC 52


>ref|XP_002515717.1| ATP binding protein, putative [Ricinus communis]
           gi|223545154|gb|EEF46664.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 663

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/69 (44%), Positives = 39/69 (56%)
 Frame = +2

Query: 101 LATPTIAQTPLGSPLFERCNTAFNYTPNTPFATNLNLTLGSLAANVSLNGFYYTTEGTTA 280
           L  PT AQ    + ++  C+T  NYT  + F  NLNLTL S AAN SL G+Y T      
Sbjct: 19  LCHPTEAQ----NDMYFNCDTTTNYTSGSAFQQNLNLTLASRAANASLTGYYTTIIDQAG 74

Query: 281 DRVYGLLQC 307
           +  YGL+QC
Sbjct: 75  NAAYGLVQC 83


>ref|XP_002274577.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like
           [Vitis vinifera]
          Length = 662

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/61 (44%), Positives = 36/61 (59%)
 Frame = +2

Query: 125 TPLGSPLFERCNTAFNYTPNTPFATNLNLTLGSLAANVSLNGFYYTTEGTTADRVYGLLQ 304
           T   + ++  C+ A NYT  + +  NLNL L SLAA+ S+ GF  TT G   D  YGL+Q
Sbjct: 21  TKAQAQVYVYCDAATNYTSGSVYEKNLNLVLTSLAASASITGFNMTTAGQDPDVAYGLIQ 80

Query: 305 C 307
           C
Sbjct: 81  C 81


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