BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032107
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321058.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
gb|ABK95241.1| unknown [Populus trichocarpa]                           96   4e-18
ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase ac...    94   1e-17
ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase ac...    94   2e-17
ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase ac...    93   3e-17

>ref|XP_002321058.1| predicted protein [Populus trichocarpa] gi|222861831|gb|EEE99373.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 52/70 (74%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
 Frame = +3

Query: 354 DDGTGCVHVVGAGGANDLVLAMGREIFEESGRSLVRGTLDYLQGL-----KRIERALPIG 518
           DDGT  V+VVGA GA+  VL +G E+FEESGRSLVRGTLDYLQGL     KRIER LP G
Sbjct: 114 DDGTDRVYVVGARGASGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTG 173

Query: 519 TSLTVVGEAV 548
           TSLTVVGEAV
Sbjct: 174 TSLTVVGEAV 183


>gb|ABK95241.1| unknown [Populus trichocarpa]
          Length = 238

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 52/70 (74%), Positives = 56/70 (80%), Gaps = 5/70 (7%)
 Frame = +3

Query: 354 DDGTGCVHVVGAGGANDLVLAMGREIFEESGRSLVRGTLDYLQGL-----KRIERALPIG 518
           DDGT  V+VVGA GA+  VL +G E+FEESGRSLVRGTLDYLQGL     KRIER LP G
Sbjct: 13  DDGTDRVYVVGARGASGFVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTG 72

Query: 519 TSLTVVGEAV 548
           TSLTVVGEAV
Sbjct: 73  TSLTVVGEAV 82


>ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           isoform 1 [Glycine max]
          Length = 339

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/69 (73%), Positives = 54/69 (78%), Gaps = 5/69 (7%)
 Frame = +3

Query: 354 DDGTGCVHVVGAGGANDLVLAMGREIFEESGRSLVRGTLDYLQGL-----KRIERALPIG 518
           DDGT  VHVVGA GA+   L +G E FEESGRSLVRGTLDYLQGL     KRIER LP+G
Sbjct: 115 DDGTDRVHVVGARGASGFALPVGIEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVG 174

Query: 519 TSLTVVGEA 545
           TSLTVVGEA
Sbjct: 175 TSLTVVGEA 183


>ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
           [Glycine max]
          Length = 339

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 51/69 (73%), Positives = 53/69 (76%), Gaps = 5/69 (7%)
 Frame = +3

Query: 354 DDGTGCVHVVGAGGANDLVLAMGREIFEESGRSLVRGTLDYLQGL-----KRIERALPIG 518
           DDGT  VHVVGA GA    L +G E FEESGRSLVRGTLDYLQGL     KRIER LP+G
Sbjct: 115 DDGTDRVHVVGARGAAGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVG 174

Query: 519 TSLTVVGEA 545
           TSLTVVGEA
Sbjct: 175 TSLTVVGEA 183


>ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|296086688|emb|CBI32323.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/70 (70%), Positives = 54/70 (77%), Gaps = 5/70 (7%)
 Frame = +3

Query: 354 DDGTGCVHVVGAGGANDLVLAMGREIFEESGRSLVRGTLDYLQGL-----KRIERALPIG 518
           DD TG  ++VGA GA  LVL +G E+FEESGRSLVRGTLDYLQGL     KRIER LP G
Sbjct: 117 DDDTGRAYIVGARGATGLVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTG 176

Query: 519 TSLTVVGEAV 548
           T LTVVGEA+
Sbjct: 177 TPLTVVGEAI 186