BLASTX nr result

ID: Coptis25_contig00032099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032099
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76561.1| unknown [Picea sitchensis]                              57   1e-06
ref|NP_001141905.1| uncharacterized protein LOC100274053 [Zea ma...    57   2e-06
gb|ABA98698.2| peroxisomal membrane protein 22 kDa, putative, ex...    57   2e-06
ref|XP_003576048.1| PREDICTED: PXMP2/4 family protein 4-like [Br...    55   5e-06
ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi...    55   8e-06

>gb|ADE76561.1| unknown [Picea sitchensis]
          Length = 287

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = -1

Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVDRGK 422
           PV LQPL+SNSFA++WT+Y+TYMASLKKV+ G+
Sbjct: 251 PVHLQPLVSNSFAFIWTVYLTYMASLKKVNIGE 283


>ref|NP_001141905.1| uncharacterized protein LOC100274053 [Zea mays]
           gi|194706390|gb|ACF87279.1| unknown [Zea mays]
           gi|195619248|gb|ACG31454.1| mpv17 / PMP22 family protein
           [Zea mays] gi|413942028|gb|AFW74677.1| Mpv17 / PMP22
           family [Zea mays]
          Length = 263

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -1

Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431
           PV LQPL+SNSF++LWTIYITYMASLKK D
Sbjct: 227 PVHLQPLVSNSFSFLWTIYITYMASLKKAD 256


>gb|ABA98698.2| peroxisomal membrane protein 22 kDa, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 269

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = -1

Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431
           PV LQPL+SNSF++LWTIYITYMASLKK D
Sbjct: 233 PVHLQPLVSNSFSFLWTIYITYMASLKKAD 262


>ref|XP_003576048.1| PREDICTED: PXMP2/4 family protein 4-like [Brachypodium distachyon]
          Length = 260

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = -1

Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVDRGKIA 416
           PV LQPL+SNSF++LWTIYITYMASLKK +   IA
Sbjct: 224 PVHLQPLVSNSFSFLWTIYITYMASLKKPELEVIA 258


>ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis]
           gi|223533132|gb|EEF34890.1| Protein SYM1, putative
           [Ricinus communis]
          Length = 268

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/30 (76%), Positives = 28/30 (93%)
 Frame = -1

Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431
           PV LQPL+SNSF+YLWT+Y+TYMAS +KVD
Sbjct: 236 PVHLQPLVSNSFSYLWTVYMTYMASREKVD 265


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