BLASTX nr result
ID: Coptis25_contig00032099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00032099 (520 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE76561.1| unknown [Picea sitchensis] 57 1e-06 ref|NP_001141905.1| uncharacterized protein LOC100274053 [Zea ma... 57 2e-06 gb|ABA98698.2| peroxisomal membrane protein 22 kDa, putative, ex... 57 2e-06 ref|XP_003576048.1| PREDICTED: PXMP2/4 family protein 4-like [Br... 55 5e-06 ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi... 55 8e-06 >gb|ADE76561.1| unknown [Picea sitchensis] Length = 287 Score = 57.4 bits (137), Expect = 1e-06 Identities = 24/33 (72%), Positives = 31/33 (93%) Frame = -1 Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVDRGK 422 PV LQPL+SNSFA++WT+Y+TYMASLKKV+ G+ Sbjct: 251 PVHLQPLVSNSFAFIWTVYLTYMASLKKVNIGE 283 >ref|NP_001141905.1| uncharacterized protein LOC100274053 [Zea mays] gi|194706390|gb|ACF87279.1| unknown [Zea mays] gi|195619248|gb|ACG31454.1| mpv17 / PMP22 family protein [Zea mays] gi|413942028|gb|AFW74677.1| Mpv17 / PMP22 family [Zea mays] Length = 263 Score = 57.0 bits (136), Expect = 2e-06 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -1 Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431 PV LQPL+SNSF++LWTIYITYMASLKK D Sbjct: 227 PVHLQPLVSNSFSFLWTIYITYMASLKKAD 256 >gb|ABA98698.2| peroxisomal membrane protein 22 kDa, putative, expressed [Oryza sativa Japonica Group] Length = 269 Score = 57.0 bits (136), Expect = 2e-06 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -1 Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431 PV LQPL+SNSF++LWTIYITYMASLKK D Sbjct: 233 PVHLQPLVSNSFSFLWTIYITYMASLKKAD 262 >ref|XP_003576048.1| PREDICTED: PXMP2/4 family protein 4-like [Brachypodium distachyon] Length = 260 Score = 55.5 bits (132), Expect = 5e-06 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = -1 Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVDRGKIA 416 PV LQPL+SNSF++LWTIYITYMASLKK + IA Sbjct: 224 PVHLQPLVSNSFSFLWTIYITYMASLKKPELEVIA 258 >ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi|223533132|gb|EEF34890.1| Protein SYM1, putative [Ricinus communis] Length = 268 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/30 (76%), Positives = 28/30 (93%) Frame = -1 Query: 520 PVPLQPLISNSFAYLWTIYITYMASLKKVD 431 PV LQPL+SNSF+YLWT+Y+TYMAS +KVD Sbjct: 236 PVHLQPLVSNSFSYLWTVYMTYMASREKVD 265