BLASTX nr result

ID: Coptis25_contig00032098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032098
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]...   108   3e-22
ref|XP_002311856.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp....   105   3e-21
emb|CBI32077.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containin...   105   4e-21

>ref|NP_177172.6| zinc ion binding protein [Arabidopsis thaliana]
           gi|332196904|gb|AEE35025.1| zinc ion binding protein
           [Arabidopsis thaliana]
          Length = 374

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/64 (76%), Positives = 55/64 (85%)
 Frame = -3

Query: 194 MECAAKGSSSVAGRCIGAATRRCGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDV 15
           MECAA+G    A RC+G  TRRCGQCGAVAYCS SHQ+SHWS HKEECERLE+QMRRVD+
Sbjct: 1   MECAARG---FATRCVGPPTRRCGQCGAVAYCSVSHQISHWSYHKEECERLEEQMRRVDL 57

Query: 14  LHDF 3
           L+DF
Sbjct: 58  LNDF 61


>ref|XP_002311856.1| predicted protein [Populus trichocarpa] gi|222851676|gb|EEE89223.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/64 (75%), Positives = 56/64 (87%)
 Frame = -3

Query: 194 MECAAKGSSSVAGRCIGAATRRCGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDV 15
           MECA KG  +   RC+G+A RRCG+CGAVAYCS SHQ+SHW+EHKEECERLEQQM+RVDV
Sbjct: 1   MECAGKGRGT---RCMGSARRRCGRCGAVAYCSVSHQMSHWNEHKEECERLEQQMKRVDV 57

Query: 14  LHDF 3
           L+DF
Sbjct: 58  LNDF 61


>ref|XP_002887282.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333123|gb|EFH63541.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 392

 Score =  105 bits (263), Expect = 3e-21
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -3

Query: 194 MECAAKGSSSVAGRCIGAATRRCGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDV 15
           MECAA+G    A RC+G  TRRCGQCG+VAYCS SHQ SHWS HKEECERLE+QMRRVD+
Sbjct: 1   MECAARG---FATRCVGPPTRRCGQCGSVAYCSVSHQSSHWSYHKEECERLEEQMRRVDL 57

Query: 14  LHDF 3
           L+DF
Sbjct: 58  LNDF 61


>emb|CBI32077.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -3

Query: 194 MECAAKGSSSVAGRCIGAATRRCGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDV 15
           MECA +G+     RCIG ATRRCG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDV
Sbjct: 1   MECAGRGTGR---RCIGPATRRCGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDV 57

Query: 14  LHDF 3
           L+DF
Sbjct: 58  LNDF 61


>ref|XP_002267535.1| PREDICTED: zinc finger MYND domain-containing protein 15-like
           [Vitis vinifera]
          Length = 369

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -3

Query: 194 MECAAKGSSSVAGRCIGAATRRCGQCGAVAYCSTSHQVSHWSEHKEECERLEQQMRRVDV 15
           MECA +G+     RCIG ATRRCG+CGAVAYCS SHQVSHWS+HKEEC RLEQQM+ VDV
Sbjct: 1   MECAGRGTGR---RCIGPATRRCGRCGAVAYCSVSHQVSHWSDHKEECGRLEQQMKLVDV 57

Query: 14  LHDF 3
           L+DF
Sbjct: 58  LNDF 61


Top