BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032091
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   276   1e-72
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   273   1e-71
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   268   4e-70
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...   254   7e-66
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...   254   7e-66

>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  276 bits (706), Expect = 1e-72
 Identities = 124/148 (83%), Positives = 136/148 (91%)
 Frame = +1

Query: 1   GEEGLVNEALALFYRMKQFHCKPDVYAYNTIICALCRVGKFKKARFLLEQMELPGFRCPP 180
           GEEGL N+ALA FYRMKQFHCKPDVYAYNTII ALCRVG F+KARFLLEQMELPGFRCPP
Sbjct: 168 GEEGLANQALAAFYRMKQFHCKPDVYAYNTIIYALCRVGNFRKARFLLEQMELPGFRCPP 227

Query: 181 DTYTYTIFISFYCKRCLQTGCRKAIRRRLWEANHLFRLMVFKGFVPDAVTYNCLIDACCK 360
           D++TYTI I  YCK  LQTGCRKA+RRRLWEANHLFR+M+FKGFVPD VTYNCLID CCK
Sbjct: 228 DSFTYTILIGSYCKYSLQTGCRKAVRRRLWEANHLFRIMLFKGFVPDVVTYNCLIDGCCK 287

Query: 361 TYRIDRALELFDDMIRKGCLPNRITYNS 444
           TYRI+RALELFDDM ++GC+PNR+TYNS
Sbjct: 288 TYRIERALELFDDMNKRGCVPNRVTYNS 315


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  273 bits (698), Expect = 1e-71
 Identities = 123/148 (83%), Positives = 136/148 (91%)
 Frame = +1

Query: 1   GEEGLVNEALALFYRMKQFHCKPDVYAYNTIICALCRVGKFKKARFLLEQMELPGFRCPP 180
           GEEGLV EAL+LFYRMK++HCKPDVYAYNTII ALCR+G FKKAR+LLEQMELPGF CPP
Sbjct: 177 GEEGLVKEALSLFYRMKKYHCKPDVYAYNTIIYALCRIGNFKKARYLLEQMELPGFYCPP 236

Query: 181 DTYTYTIFISFYCKRCLQTGCRKAIRRRLWEANHLFRLMVFKGFVPDAVTYNCLIDACCK 360
           DT+TYTI IS YCK  LQTGCRKAIRRRLWEANHLFR+M+FKGF PD VTYNCLID CCK
Sbjct: 237 DTFTYTIMISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFAPDVVTYNCLIDGCCK 296

Query: 361 TYRIDRALELFDDMIRKGCLPNRITYNS 444
           TYRI+RALELF+DM R+GC+PNR+TYNS
Sbjct: 297 TYRIERALELFEDMNRRGCVPNRVTYNS 324


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  268 bits (684), Expect = 4e-70
 Identities = 122/148 (82%), Positives = 131/148 (88%)
 Frame = +1

Query: 1   GEEGLVNEALALFYRMKQFHCKPDVYAYNTIICALCRVGKFKKARFLLEQMELPGFRCPP 180
           GEEGLVNEAL  FYRMKQFHCKPDVYAYNT+I  LCR+G FKKARFLLEQMELPGFRCPP
Sbjct: 182 GEEGLVNEALTAFYRMKQFHCKPDVYAYNTVINVLCRIGNFKKARFLLEQMELPGFRCPP 241

Query: 181 DTYTYTIFISFYCKRCLQTGCRKAIRRRLWEANHLFRLMVFKGFVPDAVTYNCLIDACCK 360
           D +TYTI IS YCK  LQTGCRKAIRRRLWEANHLFR+M+FKGF PD VTYN LID CCK
Sbjct: 242 DIFTYTILISSYCKYSLQTGCRKAIRRRLWEANHLFRIMLFKGFSPDVVTYNSLIDGCCK 301

Query: 361 TYRIDRALELFDDMIRKGCLPNRITYNS 444
           TYRI RALELF+DM ++GC PNR+TYNS
Sbjct: 302 TYRIQRALELFEDMSKRGCTPNRLTYNS 329


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score =  254 bits (648), Expect = 7e-66
 Identities = 116/148 (78%), Positives = 130/148 (87%)
 Frame = +1

Query: 1   GEEGLVNEALALFYRMKQFHCKPDVYAYNTIICALCRVGKFKKARFLLEQMELPGFRCPP 180
           GEEG V EALA FYRMK++HCKPDVYAYNTII ALCRVG FKKARFLL+QM+LPGFR PP
Sbjct: 176 GEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPP 235

Query: 181 DTYTYTIFISFYCKRCLQTGCRKAIRRRLWEANHLFRLMVFKGFVPDAVTYNCLIDACCK 360
           DTYTYTI IS YC+  +QTGCRKAIRRR+WEAN +FR M+F+GFVPD VTYNCLID CCK
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295

Query: 361 TYRIDRALELFDDMIRKGCLPNRITYNS 444
           T RI RALELF+DM  KGC+PN++TYNS
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNS 323


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score =  254 bits (648), Expect = 7e-66
 Identities = 116/148 (78%), Positives = 130/148 (87%)
 Frame = +1

Query: 1   GEEGLVNEALALFYRMKQFHCKPDVYAYNTIICALCRVGKFKKARFLLEQMELPGFRCPP 180
           GEEG V EALA FYRMK++HCKPDVYAYNTII ALCRVG FKKARFLL+QM+LPGFR PP
Sbjct: 176 GEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPP 235

Query: 181 DTYTYTIFISFYCKRCLQTGCRKAIRRRLWEANHLFRLMVFKGFVPDAVTYNCLIDACCK 360
           DTYTYTI IS YC+  +QTGCRKAIRRR+WEAN +FR M+F+GFVPD VTYNCLID CCK
Sbjct: 236 DTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCK 295

Query: 361 TYRIDRALELFDDMIRKGCLPNRITYNS 444
           T RI RALELF+DM  KGC+PN++TYNS
Sbjct: 296 TNRIGRALELFEDMKTKGCVPNQVTYNS 323