BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032081
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   374   e-101
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   369   e-100
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          358   1e-96
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   336   5e-90
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   325   2e-86

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  374 bits (959), Expect = e-101
 Identities = 181/328 (55%), Positives = 246/328 (75%), Gaps = 11/328 (3%)
 Frame = +2

Query: 146  CYVCGSRGHIAPDCKFKKGPNDGKKDKAQANVVQDG-------NFSAVVTEVNLV-SNMT 301
            C+ CG +GH + DC+  K     K    +ANV+ D        + +AVV+EVNLV SN  
Sbjct: 280  CFNCGKQGHKSVDCRLPK-----KNKPKEANVIDDITKNVYDIDLTAVVSEVNLVGSNPK 334

Query: 302  DWWVDTGATKHICGTKSAFASFTPLGEGESLFMGNSSASRVEGKGTVNLKFTSGNVLNLK 481
            +WW+DTGAT+H+C  K  F++F P+  GE +FMGNS+ S ++G+G V LK TSG  L L 
Sbjct: 335  EWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLT 394

Query: 482  DVLYVPDIRKNLVSGSLLSKKGFKLVFESDKFVLTKGGTFVGKGYLDEGLFKLNVTDF-- 655
            +VLYVP+IRKNLVSGSLL+  GF+LVF S+K VL+K G +VGKGY+ +G++KLNV     
Sbjct: 395  NVLYVPEIRKNLVSGSLLNNHGFRLVFXSNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIK 454

Query: 656  -DLNKASTSSYMVESFDLWHSRLGHVNNVSIKKLMHLGNISKNTISENKRCEVCVESKYA 832
             ++NKASTS+YM+ES +LWH RLGHVN  ++++L++L +I    I+ N +CE CVE+K  
Sbjct: 455  SNMNKASTSTYMLESSNLWHGRLGHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLT 514

Query: 833  RKPFKKVERNTELLALIHTDLCDLKGYMTRGGNKYFVTFIDDASRFCHVYLLKSKDDSLA 1012
            R  F+ VERNTE L LIH+D+CDLK   TRGGNKYF+TF+DD++++C+VYLLKSKD+++ 
Sbjct: 515  RSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIE 574

Query: 1013 KFISFKTEVENQLDKKIKIVRSDRGGEY 1096
            KF+ +KTEVENQL+KKIK++RSDRGGEY
Sbjct: 575  KFVLYKTEVENQLNKKIKVLRSDRGGEY 602


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  369 bits (948), Expect = e-100
 Identities = 180/328 (54%), Positives = 244/328 (74%), Gaps = 11/328 (3%)
 Frame = +2

Query: 146  CYVCGSRGHIAPDCKFKKGPNDGKKDKAQANV-------VQDGNFSAVVTEVNLV-SNMT 301
            C+ CG +GH + DC+  K     K    +ANV       V D + + VV+EVNLV SN  
Sbjct: 280  CFNCGKQGHKSVDCRLPK-----KNKPKEANVIDNITKNVSDIDLTTVVSEVNLVGSNPK 334

Query: 302  DWWVDTGATKHICGTKSAFASFTPLGEGESLFMGNSSASRVEGKGTVNLKFTSGNVLNLK 481
            +WW+DTGAT+H+C  K  F++F P+  GE +FMGNS+ S ++G+G V LK TSG  L L 
Sbjct: 335  EWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELTLT 394

Query: 482  DVLYVPDIRKNLVSGSLLSKKGFKLVFESDKFVLTKGGTFVGKGYLDEGLFKLNVTDF-- 655
            +VLYVP+IRKNLV GSLL+  GF+LVFES+K VL+K G +VGKGY+ +G++KLNV     
Sbjct: 395  NVLYVPEIRKNLVFGSLLNNHGFRLVFESNKVVLSKSGMYVGKGYMSDGMWKLNVMTIIK 454

Query: 656  -DLNKASTSSYMVESFDLWHSRLGHVNNVSIKKLMHLGNISKNTISENKRCEVCVESKYA 832
             ++NKASTS+YM+ES +LWH RL HVN  ++++L++L +I    I+ N +CE CVE+K  
Sbjct: 455  SNMNKASTSTYMLESSNLWHGRLRHVNYDTLRRLINLNHIPTFQINSNHKCETCVEAKLT 514

Query: 833  RKPFKKVERNTELLALIHTDLCDLKGYMTRGGNKYFVTFIDDASRFCHVYLLKSKDDSLA 1012
            R  F+ VERNTE L LIH+D+CDLK   TRGGNKYF+TF+DD++++C+VYLLKSKD+++ 
Sbjct: 515  RSSFQSVERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIE 574

Query: 1013 KFISFKTEVENQLDKKIKIVRSDRGGEY 1096
            KF+ +KTEVENQL+KKIK++RSDRGGEY
Sbjct: 575  KFVLYKTEVENQLNKKIKVLRSDRGGEY 602


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  358 bits (920), Expect = 1e-96
 Identities = 176/321 (54%), Positives = 230/321 (71%), Gaps = 4/321 (1%)
 Frame = +2

Query: 146  CYVCGSRGHIAPDCKFKKGPNDGKKDKAQANVVQDGNFSAVVTEVNLV-SNMTDWWVDTG 322
            CY C   GH A DC+  K   +    +     V D N SAVV EVN+V SN  +WW+DTG
Sbjct: 271  CYNCDKMGHKASDCRLPKKKREANVVENITQHVSDINLSAVVLEVNMVGSNPREWWIDTG 330

Query: 323  ATKHICGTKSAFASFTPLGEGESLFMGNSSASRVEGKGTVNLKFTSGNVLNLKDVLYVPD 502
            AT+H+C  K  F SF      E LFMGNS+ S +EG+G V LK TSG  L L +VLYVP+
Sbjct: 331  ATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLYVPE 390

Query: 503  IRKNLVSGSLLSKKGFKLVFESDKFVLTKGGTFVGKGYLDEGLFKLNVTDFDL---NKAS 673
            IRKNLVSGSLL+K GF++VFESD  VL+K G +VGKGY+++GLFKLNV        NKA+
Sbjct: 391  IRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNVMTLKPTINNKAT 450

Query: 674  TSSYMVESFDLWHSRLGHVNNVSIKKLMHLGNISKNTISENKRCEVCVESKYARKPFKKV 853
            +S+Y++ES ++WH RLGHVN  S++KL+++ +I    I    +C+ CVE+K  R  F+ +
Sbjct: 451  SSAYLLESSNIWHGRLGHVNFNSLRKLINMKHIPNFQIDLKHKCKTCVEAKLTRSSFQII 510

Query: 854  ERNTELLALIHTDLCDLKGYMTRGGNKYFVTFIDDASRFCHVYLLKSKDDSLAKFISFKT 1033
            +RN+E L LIH+D+CD K   TRGGNKYF+TFIDD +++C+VYLLKSKD++L KFI +K 
Sbjct: 511  QRNSEPLDLIHSDICDFKSIQTRGGNKYFITFIDDCTKYCYVYLLKSKDEALDKFILYKN 570

Query: 1034 EVENQLDKKIKIVRSDRGGEY 1096
            EVENQL++KIK +RSDRGGEY
Sbjct: 571  EVENQLNRKIKELRSDRGGEY 591


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  336 bits (862), Expect = 5e-90
 Identities = 163/273 (59%), Positives = 204/273 (74%), Gaps = 5/273 (1%)
 Frame = +2

Query: 293  NMTDWWVDTGATKHICGTKSAFASFTPLGEGESLFMGNSSASRVEGKGTVNLKFTSGNVL 472
            N  +WWVDTGAT+HIC  K  F+++ P+ + E LFMGNSS+S++EG+G V LK TSG  L
Sbjct: 459  NTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGNSSSSKIEGRGKVILKMTSGKEL 518

Query: 473  NLKDVLYVPDIRKNLVSGSLLSKKGFKLVFESDKFVLTKGGTFVGKGYLDEGLFKLNVT- 649
             L DVL+VPDI KNLVSGSLLSK GFKLVF SDKFVLTK   FVGKGYL +GLFK+NV  
Sbjct: 519  TLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVLTKNEMFVGKGYLSDGLFKMNVMT 578

Query: 650  ----DFDLNKASTSSYMVESFDLWHSRLGHVNNVSIKKLMHLGNISKNTISENKRCEVCV 817
                  + NK  +S+Y+++S ++WH RLGHVN  ++ +L+HL  + K  I  N +CE CV
Sbjct: 579  VVPKSINNNKIDSSAYLLKSSNIWHGRLGHVNYDTLCRLIHLDYLPKFNIDPNHKCETCV 638

Query: 818  ESKYARKPFKKVERNTELLALIHTDLCDLKGYMTRGGNKYFVTFIDDASRFCHVYLLKSK 997
            ESK  + PF  VER+TE L L H+D+CDLK   TRGG KYF+TFIDD +R+C+VYLLKSK
Sbjct: 639  ESKLTKVPFHSVERSTEPLDLFHSDICDLKFVQTRGGKKYFITFIDDCTRYCYVYLLKSK 698

Query: 998  DDSLAKFISFKTEVENQLDKKIKIVRSDRGGEY 1096
            D+++  F  +K EVENQL KKIK +RSDRGGEY
Sbjct: 699  DEAIEMFKHYKIEVENQLSKKIKAIRSDRGGEY 731


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  325 bits (832), Expect = 2e-86
 Identities = 172/366 (46%), Positives = 231/366 (63%), Gaps = 2/366 (0%)
 Frame = +2

Query: 5    ANLVEGNAAXXXXXXXXXXXXXXXPYANKNKQSQPHFKKKPYNPEIHCYVCGSRGHIAPD 184
            ANLVE +                     + K +    KKK    ++ CYVC   GH +  
Sbjct: 239  ANLVESSFVNRDRTKQEKGHKGKNSEKRQFKTTGGQIKKK----KLVCYVCRKEGHKSYQ 294

Query: 185  CKFKKGPNDGKKDKAQANVV-QDGNFSAVVTEVNLVSNMTDWWVDTGATKHICGTKSAFA 361
            C  +KG    +K   QAN+  QD    A + E NL+ N TDW +DTGA++H C  +    
Sbjct: 295  CNQRKG-RPSQKPTPQANLAEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLH 353

Query: 362  SFTPLGEGESLFMGNSSASRVEGKGTVNLKFTSGNVLNLKDVLYVPDIRKNLVSGSLLSK 541
             +    +GE +FMGNS+ + V GKG V LK TSG  L+L +VLYVP +R+NLVSGSLL++
Sbjct: 354  DYEDTVDGECVFMGNSATAGVIGKGKVILKLTSGKTLSLSNVLYVPSLRRNLVSGSLLNR 413

Query: 542  KGFKLVFESDKFVLTKGGTFVGKGYLDEGLFKLNVTDFDLNKASTSSYMVESFDLWHSRL 721
             G K+V E DK VLTK G FVGKGYL  GLF LN    + N AS+S+Y++ES +LWH RL
Sbjct: 414  AGLKIVLEGDKVVLTKNGNFVGKGYLSNGLFVLNTISMNAN-ASSSAYLIESANLWHGRL 472

Query: 722  GHVNNVSIKKLMHLGNISKNTISENKRCEVCVESKYARKPFKKVE-RNTELLALIHTDLC 898
            GHVN  SI+KL  +  I+ +   E  +C VC+ESK+ +KPFK VE R TELL LI++DL 
Sbjct: 473  GHVNFASIRKLKDMRLINTSETHETGKCPVCIESKFHKKPFKPVEYRTTELLELIYSDLA 532

Query: 899  DLKGYMTRGGNKYFVTFIDDASRFCHVYLLKSKDDSLAKFISFKTEVENQLDKKIKIVRS 1078
            D +   +RGG  Y+V+F+DD SRF  +YL+K+K+++++ F+ FK E ENQL K+IK +RS
Sbjct: 533  DFRTTASRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRS 592

Query: 1079 DRGGEY 1096
            DRGGEY
Sbjct: 593  DRGGEY 598