BLASTX nr result

ID: Coptis25_contig00032078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032078
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO...   140   8e-32
emb|CBI39720.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002522761.1| meiotic recombination protein spo11, putativ...   134   1e-29
ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicag...   121   5e-26

>ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
           vinifera]
          Length = 361

 Score =  140 bits (354), Expect = 8e-32
 Identities = 65/79 (82%), Positives = 77/79 (97%)
 Frame = +3

Query: 12  LVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDIC 191
           +++ QR+C+ARR DV+LRVLLIVQ+LLQEN+HGSKRDIYYMHPSVFS+Q+VVDRAINDIC
Sbjct: 64  ILTLQRECHARRLDVLLRVLLIVQQLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDIC 123

Query: 192 VLLKCSRHNLNVVSVGKGL 248
           +LL+CSRHNLNVVSVGKGL
Sbjct: 124 ILLQCSRHNLNVVSVGKGL 142


>emb|CBI39720.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/78 (82%), Positives = 76/78 (97%)
 Frame = +3

Query: 12  LVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDIC 191
           +++ QR+C+ARR DV+LRVLLIVQ+LLQEN+HGSKRDIYYMHPSVFS+Q+VVDRAINDIC
Sbjct: 64  ILTLQRECHARRLDVLLRVLLIVQQLLQENRHGSKRDIYYMHPSVFSDQSVVDRAINDIC 123

Query: 192 VLLKCSRHNLNVVSVGKG 245
           +LL+CSRHNLNVVSVGKG
Sbjct: 124 ILLQCSRHNLNVVSVGKG 141


>ref|XP_002300376.1| predicted protein [Populus trichocarpa] gi|222847634|gb|EEE85181.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/81 (79%), Positives = 74/81 (91%)
 Frame = +3

Query: 6   QILVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAIND 185
           Q +++  R C+A R DV+LRVL+IVQKLLQEN+HGSKRDIYYMHPSVFSEQ+VVDRAIND
Sbjct: 59  QQVLTLTRQCHACRIDVLLRVLVIVQKLLQENRHGSKRDIYYMHPSVFSEQSVVDRAIND 118

Query: 186 ICVLLKCSRHNLNVVSVGKGL 248
           IC+LL+CSRHNLNVVSVG GL
Sbjct: 119 ICILLQCSRHNLNVVSVGNGL 139


>ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
           gi|223537999|gb|EEF39612.1| meiotic recombination
           protein spo11, putative [Ricinus communis]
          Length = 373

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/81 (76%), Positives = 76/81 (93%)
 Frame = +3

Query: 6   QILVSFQRDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAIND 185
           Q +++ +++C ARR DVMLRVL+IVQ+LLQENKHGSKRDIYYMHPSVFS+Q+VVD+AIND
Sbjct: 62  QEILTLKKECNARRIDVMLRVLVIVQQLLQENKHGSKRDIYYMHPSVFSDQSVVDQAIND 121

Query: 186 ICVLLKCSRHNLNVVSVGKGL 248
           IC++L+CSRHNLNVVSVG GL
Sbjct: 122 ICIILQCSRHNLNVVSVGTGL 142


>ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicago truncatula]
           gi|355519089|gb|AET00713.1| Meiotic recombination
           protein SPO11 [Medicago truncatula]
          Length = 452

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/73 (78%), Positives = 65/73 (89%)
 Frame = +3

Query: 27  RDCYARRTDVMLRVLLIVQKLLQENKHGSKRDIYYMHPSVFSEQAVVDRAINDICVLLKC 206
           ++ + RR DVMLRVL+IVQKLLQENKH SKRDIYYMHPSVF +Q+VVD AINDICVL++C
Sbjct: 87  KETHVRRLDVMLRVLVIVQKLLQENKHSSKRDIYYMHPSVFLDQSVVDHAINDICVLMQC 146

Query: 207 SRHNLNVVSVGKG 245
           SRHNLNVVS G G
Sbjct: 147 SRHNLNVVSAGNG 159


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