BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032064
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   164   7e-39
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                162   2e-38
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   161   4e-38
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             160   8e-38
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   157   8e-37

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/169 (44%), Positives = 110/169 (65%)
 Frame = +1

Query: 7    FRECTGLEVNVQKSQIYFAGEDEQTCAEIEGVLQFPKGELPVKYLGLPLITTRLRTTDCS 186
            F + +GL ++++KS +Y AG       E+     F  G+LPV+YLGLPLIT RL TTDC 
Sbjct: 728  FAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCL 787

Query: 187  PLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFASFIIPQKAIDDINRLCRNFL 366
            PL+ +VRKRI SW  + LSYAGRL LI +VL ++  +W A+F +P+K I ++ ++C  FL
Sbjct: 788  PLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFL 847

Query: 367  WTGPDCTQSHALIGWESLCYLYDEGGLGIRDLSKVNQASNMKHIWKLVT 513
            W+G +   + A I W  +C   DEGGLG+R L + N    +K +WK+V+
Sbjct: 848  WSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVS 896


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/175 (45%), Positives = 114/175 (65%), Gaps = 3/175 (1%)
 Frame = +1

Query: 1   NTFREC---TGLEVNVQKSQIYFAGEDEQTCAEIEGVLQFPKGELPVKYLGLPLITTRLR 171
           N F+E    +GL ++++KS +Y AG  E     I     F  G+LPV+YLGLPL+T ++ 
Sbjct: 296 NIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMT 355

Query: 172 TTDCSPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFASFIIPQKAIDDINRL 351
           T D SPL+ KVR +I SW  ++LSYAGRL LI +V+ +LS +W +++ +P   I +I +L
Sbjct: 356 TADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKL 415

Query: 352 CRNFLWTGPDCTQSHALIGWESLCYLYDEGGLGIRDLSKVNQASNMKHIWKLVTK 516
           C  FLW+GP+     A I W SLC L  EGGLGI+ L + N+ S +K IW+LV++
Sbjct: 416 CSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSR 470


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/170 (42%), Positives = 112/170 (65%)
 Frame = +1

Query: 4   TFRECTGLEVNVQKSQIYFAGEDEQTCAEIEGVLQFPKGELPVKYLGLPLITTRLRTTDC 183
           TF +C+GL ++++KS +YFAG    +  E+     F  G LPV+YLGLPL+T +L +TD 
Sbjct: 109 TFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDY 168

Query: 184 SPLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFASFIIPQKAIDDINRLCRNF 363
            PLI  ++K+I SW  + LSYAGRL LI +VL ++  +W  +F +P++ I +I+++C  +
Sbjct: 169 LPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAY 228

Query: 364 LWTGPDCTQSHALIGWESLCYLYDEGGLGIRDLSKVNQASNMKHIWKLVT 513
           LW+G D   S A I W  +C   DEGGLG+R L + N  S +K IW++++
Sbjct: 229 LWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIIS 278


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/169 (43%), Positives = 114/169 (67%)
 Frame = +1

Query: 7   FRECTGLEVNVQKSQIYFAGEDEQTCAEIEGVLQFPKGELPVKYLGLPLITTRLRTTDCS 186
           F + +GL+++++KS IY AG  E    EI+   QF  G+LPV+YLGLPL+T RL  TD S
Sbjct: 255 FAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYS 314

Query: 187 PLISKVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFASFIIPQKAIDDINRLCRNFL 366
           PL+  ++K+I +W  + LSYAGRL LI +VL ++  +W A+F +P++ I +I+++C  FL
Sbjct: 315 PLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFL 374

Query: 367 WTGPDCTQSHALIGWESLCYLYDEGGLGIRDLSKVNQASNMKHIWKLVT 513
           W+GPD       + W  +C    EGGLG+R L ++N+ S +K IW++V+
Sbjct: 375 WSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVS 423


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/166 (44%), Positives = 108/166 (65%)
 Frame = +1

Query: 19   TGLEVNVQKSQIYFAGEDEQTCAEIEGVLQFPKGELPVKYLGLPLITTRLRTTDCSPLIS 198
            +GL ++++KS +Y A   E     I     F  G+LPV+YLG PL+T ++ T D SPL+ 
Sbjct: 874  SGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLD 933

Query: 199  KVRKRIQSWKGKALSYAGRLQLIKAVLNNLSVYWFASFIIPQKAIDDINRLCRNFLWTGP 378
            KVR +I SW  ++LSYAGRL LI +V+ +LS +W +++ +P   I +I +LC  FLW+GP
Sbjct: 934  KVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGP 993

Query: 379  DCTQSHALIGWESLCYLYDEGGLGIRDLSKVNQASNMKHIWKLVTK 516
            +     A I W SLC L  EGGLGI+ L + N+ S +K IW+LV++
Sbjct: 994  ELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSR 1039