BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032063
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinif...    94   9e-18
emb|CBI29966.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_002531583.1| programmed cell death protein, putative [Ric...    89   3e-16
ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Ar...    87   2e-15
ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]      84   1e-14

>ref|XP_002276633.2| PREDICTED: protein RRP5 homolog [Vitis vinifera]
          Length = 1879

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = +2

Query: 2   DIFHLENVCPSTAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSRFDVSD 181
           DIFHL+   PS+ WK++YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP      D
Sbjct: 346 DIFHLQTTFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGD 405


>emb|CBI29966.3| unnamed protein product [Vitis vinifera]
          Length = 1862

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = +2

Query: 2   DIFHLENVCPSTAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSRFDVSD 181
           DIFHL+   PS+ WK++YNQ+KK+NARILFIDPSTRAVGLT+NPHLV+NKAPP      D
Sbjct: 345 DIFHLQTTFPSSNWKDDYNQNKKVNARILFIDPSTRAVGLTLNPHLVNNKAPPCPVKTGD 404


>ref|XP_002531583.1| programmed cell death protein, putative [Ricinus communis]
           gi|223528779|gb|EEF30786.1| programmed cell death
           protein, putative [Ricinus communis]
          Length = 607

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 38/60 (63%), Positives = 49/60 (81%)
 Frame = +2

Query: 2   DIFHLENVCPSTAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSRFDVSD 181
           DIFHL+N   ++ W+++YN +KK+NARILF+DPSTRAVGLT+N HLVHN APP+   V D
Sbjct: 354 DIFHLQNTFSASNWRDDYNNNKKVNARILFVDPSTRAVGLTLNQHLVHNHAPPTHVKVGD 413


>ref|XP_002884876.1| S1 RNA-binding domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297330716|gb|EFH61135.1| S1 RNA-binding
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1843

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 38/53 (71%), Positives = 47/53 (88%)
 Frame = +2

Query: 2   DIFHLENVCPSTAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPP 160
           D+FHL+N   + +WK+EYNQ+K +NARILFIDPS+RAVGLT+NPHLV NKAPP
Sbjct: 283 DLFHLKNPLSNKSWKDEYNQNKMVNARILFIDPSSRAVGLTLNPHLVCNKAPP 335


>ref|XP_003518021.1| PREDICTED: protein RRP5 homolog [Glycine max]
          Length = 2174

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +2

Query: 2   DIFHLENVCPSTAWKEEYNQHKKMNARILFIDPSTRAVGLTMNPHLVHNKAPPSRFDVSD 181
           D+FHL+N+ P T WK++ ++ +K+ +RILFIDPS+RAVGLT+NPHLV N+APPS   + D
Sbjct: 483 DLFHLQNIYPGTNWKDKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGD 542