BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032051
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19832.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27

>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/70 (87%), Positives = 65/70 (92%)
 Frame = +1

Query: 1   THSEKLAVGYGLLKQPREATIRVLKNLRICGDCHTAFKFMSKVVEREIVVRDGKRFHHFK 180
           THSEKLAVG+GLLK P  AT+RV KNLRICGDCH AFKFMSKVVEREIVVRDGKRFHHFK
Sbjct: 475 THSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFK 534

Query: 181 SGECSCGDYW 210
           +GECSCG+YW
Sbjct: 535 NGECSCGNYW 544


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/70 (87%), Positives = 65/70 (92%)
 Frame = +1

Query: 1   THSEKLAVGYGLLKQPREATIRVLKNLRICGDCHTAFKFMSKVVEREIVVRDGKRFHHFK 180
           THSEKLAVG+GLLK P  AT+RV KNLRICGDCH AFKFMSKVVEREIVVRDGKRFHHFK
Sbjct: 730 THSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFK 789

Query: 181 SGECSCGDYW 210
           +GECSCG+YW
Sbjct: 790 NGECSCGNYW 799


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  129 bits (324), Expect = 3e-28
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = +1

Query: 1   THSEKLAVGYGLLKQPREATIRVLKNLRICGDCHTAFKFMSKVVEREIVVRDGKRFHHFK 180
           THSEKLAV YG +K P  AT+RV KNLRICGDCH AFKFMSKVV REIVVRDGKRFHHF+
Sbjct: 728 THSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFR 787

Query: 181 SGECSCGDYW 210
            G+CSCGDYW
Sbjct: 788 DGKCSCGDYW 797


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 63/70 (90%)
 Frame = +1

Query: 1   THSEKLAVGYGLLKQPREATIRVLKNLRICGDCHTAFKFMSKVVEREIVVRDGKRFHHFK 180
           THSEKLAV YG++K P  ATIRV KNLRICGDCH AFK++SKVVEREIVVRD KRFHHFK
Sbjct: 726 THSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFK 785

Query: 181 SGECSCGDYW 210
           +GECSCG+YW
Sbjct: 786 NGECSCGNYW 795


>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +1

Query: 1   THSEKLAVGYGLLKQPREATIRVLKNLRICGDCHTAFKFMSKVVEREIVVRDGKRFHHFK 180
           THSEKLAVG+G++K P +AT+RV KN+RICGDCH AFKFMSKV  REI+VRD KRFHHFK
Sbjct: 728 THSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFK 787

Query: 181 SGECSCGDYW 210
           +G+CSC DYW
Sbjct: 788 NGDCSCRDYW 797