BLASTX nr result

ID: Coptis25_contig00032044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032044
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group] g...    86   3e-15
gb|ABA18106.1| hAT-like transposase [Capsella rubella]                 82   6e-14
ref|NP_001130635.1| uncharacterized protein LOC100191735 [Zea ma...    82   6e-14
ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783...    80   2e-13
emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group] gi...    80   2e-13

>ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group]
           gi|113630783|dbj|BAF24464.1| Os09g0101200 [Oryza sativa
           Japonica Group]
          Length = 501

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = -2

Query: 439 YRINDDFNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPSEYAFDRRERMMNQSWSYLPP 260
           Y  +++F+VL WWK  +  YP LS MARD L +PVS V SE AF    R++ +  + + P
Sbjct: 405 YNSDENFDVLSWWKRNADVYPTLSLMARDFLAIPVSTVSSESAFSAAGRLLGKDRTSMSP 464

Query: 259 ELLEASLCLKDWYLAKEGSQDAYSNE 182
           E LEAS+CLKDW +  +  +  Y+ E
Sbjct: 465 ETLEASICLKDWIIGFDDDEKGYATE 490


>gb|ABA18106.1| hAT-like transposase [Capsella rubella]
          Length = 665

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/77 (48%), Positives = 50/77 (64%)
 Frame = -2

Query: 424 DFNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPSEYAFDRRERMMNQSWSYLPPELLEA 245
           +F+VLDWWK     YP LS MARD+L++PVSA   +Y FD   R M++  + L PE +EA
Sbjct: 578 EFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETVEA 637

Query: 244 SLCLKDWYLAKEGSQDA 194
            +C K+W L K+ S  A
Sbjct: 638 LICAKEWLLEKDASSAA 654


>ref|NP_001130635.1| uncharacterized protein LOC100191735 [Zea mays]
           gi|194689700|gb|ACF78934.1| unknown [Zea mays]
          Length = 680

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/71 (47%), Positives = 50/71 (70%)
 Frame = -2

Query: 436 RINDDFNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPSEYAFDRRERMMNQSWSYLPPE 257
           RI++ F +L+WW+  +  YP LSAMARD+L +P+S VPSE+AF    R+++ + S + PE
Sbjct: 601 RIDERFEILNWWRTNANKYPVLSAMARDILAIPLSTVPSEFAFSAGGRILDDNRSTMTPE 660

Query: 256 LLEASLCLKDW 224
            LE  +C KDW
Sbjct: 661 TLECFVCCKDW 671


>ref|XP_003550816.1| PREDICTED: uncharacterized protein LOC100783258 [Glycine max]
          Length = 1154

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
 Frame = -2

Query: 424  DFNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPSEYAFDRRERMMNQSWSYLPPELLEA 245
            DF+VL WWK     YP LS MARD+L+VPVS+VP E  FD + + M+Q  S L PE +EA
Sbjct: 1071 DFDVLGWWKLNKLKYPTLSKMARDILSVPVSSVPPESVFDTKVKEMDQYRSSLRPETVEA 1130

Query: 244  SLCLKDW--YLAKEGS 203
             +C KDW  Y A E S
Sbjct: 1131 IVCAKDWMQYGAAEAS 1146


>emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group]
           gi|38346748|emb|CAD40758.2| OSJNBa0081G05.11 [Oryza
           sativa Japonica Group] gi|116309610|emb|CAH66665.1|
           OSIGBa0110B10.2 [Oryza sativa Indica Group]
          Length = 557

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/71 (49%), Positives = 50/71 (70%)
 Frame = -2

Query: 430 NDDFNVLDWWKAQSGNYPNLSAMARDLLTVPVSAVPSEYAFDRRERMMNQSWSYLPPELL 251
           ++ F+VLDWWK Q+  +P LSAMA+D L +P+S V SE AF  R R++  + S L PE+L
Sbjct: 469 SESFDVLDWWKRQAQKFPVLSAMAKDFLAIPLSTVSSESAFSCRGRILGDTRSSLTPEML 528

Query: 250 EASLCLKDWYL 218
           +A +C KDW +
Sbjct: 529 DALICAKDWLI 539


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