BLASTX nr result

ID: Coptis25_contig00032043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032043
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600910.1| NF-X1-type zinc finger protein NFXL1 [Medica...   248   6e-64
ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NF...   244   8e-63
emb|CAN64083.1| hypothetical protein VITISV_006934 [Vitis vinifera]   244   8e-63
ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NF...   230   1e-58
ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type z...   227   1e-57

>ref|XP_003600910.1| NF-X1-type zinc finger protein NFXL1 [Medicago truncatula]
           gi|355489958|gb|AES71161.1| NF-X1-type zinc finger
           protein NFXL1 [Medicago truncatula]
          Length = 878

 Score =  248 bits (632), Expect = 6e-64
 Identities = 121/163 (74%), Positives = 130/163 (79%), Gaps = 4/163 (2%)
 Frame = +1

Query: 70  RHTNLDASIFKSYLQLNNHSS----SPDISKIQSFLLSSQSGALSCLICLERIRISDPTW 237
           RH++L  SIFKSY   + HSS    S D+SKIQSFL SS SGALSCLICLERI+ SDPTW
Sbjct: 32  RHSDLSESIFKSYFNFSGHSSTNATSADLSKIQSFLTSSSSGALSCLICLERIKPSDPTW 91

Query: 238 SCNKSCFAVFHLICIQSWARQASDLAAERAVARLSREHFPVAAAKALETSNWNCPKCRNE 417
           SC   CFAVFHL CIQSW+RQASDLAA RAV RLS     V+A  A ETS WNCPKCR E
Sbjct: 92  SCTSLCFAVFHLFCIQSWSRQASDLAASRAVTRLS-----VSAEHAAETSLWNCPKCRVE 146

Query: 418 YGKTLIPKVYLCFCGKLENPPSDDPWVLPHSCGEVCGRSLKYD 546
           Y K+LIPK+Y CFCGKLENPPSDDPWVLPHSCGEVCGRSLK D
Sbjct: 147 YPKSLIPKIYFCFCGKLENPPSDDPWVLPHSCGEVCGRSLKND 189


>ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NFXL2 [Vitis vinifera]
          Length = 875

 Score =  244 bits (622), Expect = 8e-63
 Identities = 115/157 (73%), Positives = 129/157 (82%)
 Frame = +1

Query: 70  RHTNLDASIFKSYLQLNNHSSSPDISKIQSFLLSSQSGALSCLICLERIRISDPTWSCNK 249
           RH +L  SIFKSY+Q+   SS PD+SKIQSFL SS+SGALSCLICLERIR SDPTWSC  
Sbjct: 32  RHGDLSDSIFKSYIQITGRSS-PDLSKIQSFLTSSRSGALSCLICLERIRPSDPTWSCTS 90

Query: 250 SCFAVFHLICIQSWARQASDLAAERAVARLSREHFPVAAAKALETSNWNCPKCRNEYGKT 429
            CFAVFHLICIQSWARQASDL+A RA ARLS + FP AAAKA+E + W+CPKCR EY K 
Sbjct: 91  GCFAVFHLICIQSWARQASDLSASRATARLSADLFPAAAAKAIEDAAWHCPKCRFEYSKA 150

Query: 430 LIPKVYLCFCGKLENPPSDDPWVLPHSCGEVCGRSLK 540
           LIPK Y CFCGKL++PP  DPW+LPHSCGE+C R LK
Sbjct: 151 LIPKAYFCFCGKLQDPPR-DPWILPHSCGEICNRPLK 186


>emb|CAN64083.1| hypothetical protein VITISV_006934 [Vitis vinifera]
          Length = 797

 Score =  244 bits (622), Expect = 8e-63
 Identities = 115/157 (73%), Positives = 129/157 (82%)
 Frame = +1

Query: 70  RHTNLDASIFKSYLQLNNHSSSPDISKIQSFLLSSQSGALSCLICLERIRISDPTWSCNK 249
           RH +L  SIFKSY+Q+   SS PD+SKIQSFL SS+SGALSCLICLERIR SDPTWSC  
Sbjct: 32  RHGDLSDSIFKSYIQITGRSS-PDLSKIQSFLTSSRSGALSCLICLERIRPSDPTWSCTS 90

Query: 250 SCFAVFHLICIQSWARQASDLAAERAVARLSREHFPVAAAKALETSNWNCPKCRNEYGKT 429
            CFAVFHLICIQSWARQASDL+A RA ARLS + FP AAAKA+E + W+CPKCR EY K 
Sbjct: 91  GCFAVFHLICIQSWARQASDLSASRATARLSADLFPAAAAKAIEDAAWHCPKCRFEYSKA 150

Query: 430 LIPKVYLCFCGKLENPPSDDPWVLPHSCGEVCGRSLK 540
           LIPK Y CFCGKL++PP  DPW+LPHSCGE+C R LK
Sbjct: 151 LIPKAYFCFCGKLQDPPR-DPWILPHSCGEICNRPLK 186


>ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Glycine max]
          Length = 877

 Score =  230 bits (587), Expect = 1e-58
 Identities = 109/159 (68%), Positives = 130/159 (81%)
 Frame = +1

Query: 70  RHTNLDASIFKSYLQLNNHSSSPDISKIQSFLLSSQSGALSCLICLERIRISDPTWSCNK 249
           RH++L  SIFK YL+L+ HS + D+SKIQSFL SS +GALSCLICLERI+ SD TWSC+ 
Sbjct: 46  RHSDLSDSIFKPYLELSGHSGT-DLSKIQSFLTSSSAGALSCLICLERIKPSDATWSCSS 104

Query: 250 SCFAVFHLICIQSWARQASDLAAERAVARLSREHFPVAAAKALETSNWNCPKCRNEYGKT 429
            CFAVFHL CIQSWARQASDLAA RAV RLS     +++A A +T+ WNCPKCR+EY K+
Sbjct: 105 LCFAVFHLFCIQSWARQASDLAAARAVTRLS-----ISSASASDTALWNCPKCRSEYNKS 159

Query: 430 LIPKVYLCFCGKLENPPSDDPWVLPHSCGEVCGRSLKYD 546
            IPK Y CFCGK+ENPP +DPW+LPHSCGEVCGR LK++
Sbjct: 160 HIPKTYFCFCGKIENPP-NDPWILPHSCGEVCGRQLKHN 197


>ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type zinc finger protein
           NFXL2-like, partial [Cucumis sativus]
          Length = 628

 Score =  227 bits (578), Expect = 1e-57
 Identities = 109/160 (68%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
 Frame = +1

Query: 70  RHTNLDASIFKSYLQLNNHSSSP-DISKIQSFLLSSQSGALSCLICLERIRISDPTWSCN 246
           RH +L  SIFK+Y +    S++  D+SKIQSFL SS SGALSCLICLERIR+SDPTWSC+
Sbjct: 29  RHLDLSDSIFKAYFEFTGRSTTTADLSKIQSFLTSSSSGALSCLICLERIRLSDPTWSCS 88

Query: 247 KSCFAVFHLICIQSWARQASDLAAERAVARLSREHFPVAAAKALETSNWNCPKCRNEYGK 426
             CFAVFHL CIQSWARQASDLAA RA  R       ++  K  E S WNCPKCR EY K
Sbjct: 89  SLCFAVFHLFCIQSWARQASDLAAARAATRSL-----ISPDKPDEHSVWNCPKCRVEYSK 143

Query: 427 TLIPKVYLCFCGKLENPPSDDPWVLPHSCGEVCGRSLKYD 546
           + IPK Y CFCGKLENPPSDDPW+LPHSCGEVCGR LK++
Sbjct: 144 SSIPKRYFCFCGKLENPPSDDPWILPHSCGEVCGRPLKHN 183


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