BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032028
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   179   2e-43
gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|5025357...   179   2e-43
ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyra...   176   2e-42
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   174   7e-42
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   170   1e-40

>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/115 (68%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 YVRFLGNGMMVSAGTDGCLKLWDMKDAQTIRTYRGHTNNRNFVGLSVWRNGGLLGCGSES 164
           YVRFL  G +V+AGTDGCLKLW ++D + IRTY GH NNRNFVGLSVWRNG L GCGSE+
Sbjct: 243 YVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSEN 302

Query: 163 NEVFVYDKRWGNPMWVHRLEPT-IGGGRDQRFISSVCWRQVGNDECTLLAGGCDG 2
           N VFVYD+RWG P+WV   EP  +  G D+RF+SSVCWRQ G D+CTL+AGG DG
Sbjct: 303 NRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 357


>gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|50253578|gb|AAT71991.1|
           At5g23730 [Arabidopsis thaliana]
          Length = 243

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/115 (68%), Positives = 92/115 (80%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 YVRFLGNGMMVSAGTDGCLKLWDMKDAQTIRTYRGHTNNRNFVGLSVWRNGGLLGCGSES 164
           YVRFL  G +V+AGTDGCLKLW ++D + IRTY GH NNRNFVGLSVWRNG L GCGSE+
Sbjct: 118 YVRFLDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSEN 177

Query: 163 NEVFVYDKRWGNPMWVHRLEPT-IGGGRDQRFISSVCWRQVGNDECTLLAGGCDG 2
           N VFVYD+RWG P+WV   EP  +  G D+RF+SSVCWRQ G D+CTL+AGG DG
Sbjct: 178 NRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 232


>ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317908|gb|EFH48330.1| nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  176 bits (446), Expect = 2e-42
 Identities = 78/115 (67%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 YVRFLGNGMMVSAGTDGCLKLWDMKDAQTIRTYRGHTNNRNFVGLSVWRNGGLLGCGSES 164
           YVRFL    +V+AGTDGCLKLW ++D + IRTY GH NNRNFVGLSVWRNG L GCGSE+
Sbjct: 240 YVRFLDGCTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSEN 299

Query: 163 NEVFVYDKRWGNPMWVHRLEPT-IGGGRDQRFISSVCWRQVGNDECTLLAGGCDG 2
           N VFVYD+RWG P+WV   EP  +  G D+RF+SSVCWRQ G D+CTL+AGG DG
Sbjct: 300 NRVFVYDRRWGKPVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDG 354


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  174 bits (441), Expect = 7e-42
 Identities = 78/114 (68%), Positives = 87/114 (76%)
 Frame = -2

Query: 343 YVRFLGNGMMVSAGTDGCLKLWDMKDAQTIRTYRGHTNNRNFVGLSVWRNGGLLGCGSES 164
           YVRFL   MMV++GTDGCL+LW M DA+ IR Y GH N RNFVGLSVWR GGLLGCGSE+
Sbjct: 257 YVRFLDEHMMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSEN 316

Query: 163 NEVFVYDKRWGNPMWVHRLEPTIGGGRDQRFISSVCWRQVGNDECTLLAGGCDG 2
           N VFVYDKRW  P+WVH        G D +F+SSVCWRQVG D CTL+AGG DG
Sbjct: 317 NHVFVYDKRWSEPIWVHEFGGGSRDGCDPKFVSSVCWRQVGKDVCTLVAGGSDG 370


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/115 (67%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 YVRFLGNGMMVSAGTDGCLKLWDMKDAQTIRTYRGHTNNRNFVGLSVWRNGGLLGCGSES 164
           YVRFL    MV++GTDGCL+LW M DA+ IR Y GH N R+FVGLSVWR GGLLGCGSE+
Sbjct: 257 YVRFLDQHTMVTSGTDGCLRLWSMHDARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSEN 316

Query: 163 NEVFVYDKRWGNPMWVHRLEPTIGGGRDQRFISSVCWRQV-GNDECTLLAGGCDG 2
           N VFVYDKRWG P+WVH        GRD  F+SSVCWRQV G D CTL+AGG DG
Sbjct: 317 NHVFVYDKRWGEPIWVHEFGVGSRDGRDPNFVSSVCWRQVGGEDGCTLVAGGSDG 371