BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032027
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...   291   1e-76
emb|CBI30711.3| unnamed protein product [Vitis vinifera]              291   1e-76
ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi...   279   6e-73
ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containi...   275   7e-72

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  291 bits (745), Expect = 1e-76
 Identities = 137/181 (75%), Positives = 152/181 (83%)
 Frame = +1

Query: 1    AEKVFELELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHV 180
            AE VFELE +NTGYY+LLANIYAEAEKW EVKKLRERIGRRGLRK PGCSWIE++ K H+
Sbjct: 644  AEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHI 703

Query: 181  FVASDRSHQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMA 360
            FV  D SH  A K+E LL + R RMK+EG  P  RYALI A DTEKE  LCGHSEK+AMA
Sbjct: 704  FVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMA 763

Query: 361  YGILNLPYGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGY 540
            +GIL+LP GKTVRVTKNLRVCGDCHEMAKFMSKM  ++I+LRDSNRFHHF DG CSCRG+
Sbjct: 764  FGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGH 823

Query: 541  W 543
            W
Sbjct: 824  W 824


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  291 bits (745), Expect = 1e-76
 Identities = 137/181 (75%), Positives = 152/181 (83%)
 Frame = +1

Query: 1    AEKVFELELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHV 180
            AE VFELE +NTGYY+LLANIYAEAEKW EVKKLRERIGRRGLRK PGCSWIE++ K H+
Sbjct: 517  AEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHI 576

Query: 181  FVASDRSHQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMA 360
            FV  D SH  A K+E LL + R RMK+EG  P  RYALI A DTEKE  LCGHSEK+AMA
Sbjct: 577  FVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMA 636

Query: 361  YGILNLPYGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGY 540
            +GIL+LP GKTVRVTKNLRVCGDCHEMAKFMSKM  ++I+LRDSNRFHHF DG CSCRG+
Sbjct: 637  FGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGH 696

Query: 541  W 543
            W
Sbjct: 697  W 697


>ref|XP_002305733.1| predicted protein [Populus trichocarpa] gi|222848697|gb|EEE86244.1|
           predicted protein [Populus trichocarpa]
          Length = 571

 Score =  280 bits (717), Expect = 2e-73
 Identities = 130/181 (71%), Positives = 151/181 (83%)
 Frame = +1

Query: 1   AEKVFELELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHV 180
           AE VFELE +NTGYY+LLAN YAEAEKW EVKKLR++IGRRGL+K PGCSWIEV+SK H+
Sbjct: 391 AEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHI 450

Query: 181 FVASDRSHQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMA 360
           F+A + SH QAKK+E LL R+R +MK+EG  P  RYALI A   +KE  LCGHSEKLAMA
Sbjct: 451 FLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMA 510

Query: 361 YGILNLPYGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGY 540
           +GILNLP  +T+RV+KNLRVCGDCHEMAKF+SK   +EIVLRDSNRFHHF DG C CRG+
Sbjct: 511 FGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGF 570

Query: 541 W 543
           W
Sbjct: 571 W 571


>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
            gi|449500809|ref|XP_004161200.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  279 bits (713), Expect = 6e-73
 Identities = 128/181 (70%), Positives = 154/181 (85%)
 Frame = +1

Query: 1    AEKVFELELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHV 180
            AE++FELE +NTGYY+LLANIYAEAEKW EV+KLR++IG+RGL+K PGCSWIE++ K ++
Sbjct: 746  AERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINI 805

Query: 181  FVASDRSHQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMA 360
            FVA D S  QAKK+E LL R+R +MK+EG  P   YAL+ A + EKE  LCGHSEKLAMA
Sbjct: 806  FVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMA 865

Query: 361  YGILNLPYGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGY 540
            +G+LNLP GKT+RVTKNLRVCGDCHEMAKFMSK  ++EI+LRDS+RFHHF DG CSCRGY
Sbjct: 866  FGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGY 925

Query: 541  W 543
            W
Sbjct: 926  W 926


>ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  275 bits (704), Expect = 7e-72
 Identities = 131/181 (72%), Positives = 149/181 (82%)
 Frame = +1

Query: 1    AEKVFELELDNTGYYILLANIYAEAEKWAEVKKLRERIGRRGLRKKPGCSWIEVRSKFHV 180
            AE VFELE DN GYY+LLANIYAEAEKW EVKKLRERIG+RGL+K PGCSWIEV+ KF  
Sbjct: 1047 AEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTT 1106

Query: 181  FVASDRSHQQAKKMESLLARVRMRMKDEGCLPDNRYALIIASDTEKEEVLCGHSEKLAMA 360
            FV++D +H QAK + SLL  +R++MK+EG  P  RYALI A D EKE  LCGHSEKLAMA
Sbjct: 1107 FVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMA 1166

Query: 361  YGILNLPYGKTVRVTKNLRVCGDCHEMAKFMSKMFAKEIVLRDSNRFHHFNDGRCSCRGY 540
            +GILNLP G+T+RV KNLRVC DCHEMAKFMSK   +EI+LRDSNRFHHF DG CSCR +
Sbjct: 1167 FGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCSCRDF 1226

Query: 541  W 543
            W
Sbjct: 1227 W 1227