BLASTX nr result

ID: Coptis25_contig00032024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032024
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558536.1| PREDICTED: uncharacterized protein LOC100846...   103   1e-20
ref|XP_002308913.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002467576.1| hypothetical protein SORBIDRAFT_01g030350 [S...   100   1e-19
gb|AFW84159.1| hypothetical protein ZEAMMB73_503229 [Zea mays]         99   5e-19
dbj|BAK00284.1| predicted protein [Hordeum vulgare subsp. vulgare]     99   5e-19

>ref|XP_003558536.1| PREDICTED: uncharacterized protein LOC100846144 [Brachypodium
           distachyon]
          Length = 736

 Score =  103 bits (257), Expect = 1e-20
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = -2

Query: 240 VLEKVFTHTWENIYIRSCRLLYGPICLQDSGFRSQSNVEYAHRAALHRHSMWSSVAVDIL 61
           +L+KVF H+W NI+IRSC++LY PI LQD+   S  NVEYAHRAA+ +H++WSS+ +D+L
Sbjct: 329 MLQKVFRHSWRNIHIRSCQILYWPIFLQDTSLSSSVNVEYAHRAAIQKHALWSSIIIDLL 388

Query: 60  LGNAVGFTLLLHVDTACSW 4
           +G  +G  LLL+ +  CSW
Sbjct: 389 MGFILGAALLLNTEIICSW 407


>ref|XP_002308913.1| predicted protein [Populus trichocarpa] gi|222854889|gb|EEE92436.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  102 bits (255), Expect = 3e-20
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = -2

Query: 231 KVFTHTWENIYIRSCRLLYGPICLQDSGFRSQSNVEYAHRAALHRHSMWSSVAVDILLGN 52
           +VF  TW  I IR C++LY PI LQD+G RSQS VEY   A LHR+SMWSS+AVD+LLGN
Sbjct: 128 RVFCTTWTQIQIRCCQILYWPIVLQDNGLRSQSCVEYKENAVLHRNSMWSSLAVDLLLGN 187

Query: 51  AVGFTLLLHVDTACSWV 1
            +G  LL+H ++ C W+
Sbjct: 188 LMGLALLIHAESVCQWI 204


>ref|XP_002467576.1| hypothetical protein SORBIDRAFT_01g030350 [Sorghum bicolor]
           gi|241921430|gb|EER94574.1| hypothetical protein
           SORBIDRAFT_01g030350 [Sorghum bicolor]
          Length = 706

 Score =  100 bits (249), Expect = 1e-19
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = -2

Query: 240 VLEKVFTHTWENIYIRSCRLLYGPICLQDSGFRSQSNVEYAHRAALHRHSMWSSVAVDIL 61
           +L KVF H+W NI++RSC++LY PI LQD+   S  NVEYAH+AA+ +H++WSSV VD+L
Sbjct: 299 MLNKVFRHSWNNIHLRSCQILYWPIVLQDASLSSTVNVEYAHKAAIRKHALWSSVIVDLL 358

Query: 60  LGNAVGFTLLLHVDTACSW 4
           +G  +G   LL+ +T C W
Sbjct: 359 MGFVLGAAFLLNTETICIW 377


>gb|AFW84159.1| hypothetical protein ZEAMMB73_503229 [Zea mays]
          Length = 455

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 40/79 (50%), Positives = 58/79 (73%)
 Frame = -2

Query: 240 VLEKVFTHTWENIYIRSCRLLYGPICLQDSGFRSQSNVEYAHRAALHRHSMWSSVAVDIL 61
           +L KVF H+W NI++RSC++LY PI  QD+   S  NVEYAH+AA+ +H++WSS+ VD+L
Sbjct: 258 MLNKVFRHSWNNIHLRSCQILYWPIVFQDASLSSTVNVEYAHKAAIRKHALWSSIIVDLL 317

Query: 60  LGNAVGFTLLLHVDTACSW 4
           +G  +G   LL+ +T C W
Sbjct: 318 MGFVLGAAFLLNTETICIW 336


>dbj|BAK00284.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 735

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 39/80 (48%), Positives = 63/80 (78%)
 Frame = -2

Query: 240 VLEKVFTHTWENIYIRSCRLLYGPICLQDSGFRSQSNVEYAHRAALHRHSMWSSVAVDIL 61
           +L+KVF H+W+N+++R  ++LY PI LQD+   S  NVEYAHRAA+ +H++WS++ +D+L
Sbjct: 329 ILQKVFRHSWKNMHLRCSQILYWPIFLQDTSLSSYVNVEYAHRAAIQKHALWSNIIMDLL 388

Query: 60  LGNAVGFTLLLHVDTACSWV 1
           +G  +G  LLL+++T CSW+
Sbjct: 389 MGFILGAALLLNMETICSWI 408


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