BLASTX nr result

ID: Coptis25_contig00032022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032022
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|2...   213   2e-53
ref|XP_002533644.1| conserved hypothetical protein [Ricinus comm...   205   3e-51
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   205   3e-51
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              204   8e-51
ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like ...   203   1e-50

>ref|XP_002316217.1| predicted protein [Populus trichocarpa] gi|222865257|gb|EEF02388.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/141 (69%), Positives = 114/141 (80%)
 Frame = +3

Query: 3   MEDGEAPHHLLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETE 182
           MED EAPHH+LLLRNFMSQGLV NQPLLYASP+ DP+ FLGTLP P S KDDKSR  +TE
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVQNQPLLYASPAKDPRGFLGTLPCPSSSKDDKSRNHDTE 119

Query: 183 QEKGLRIAWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKPLKVPSLGAQHIDCFSILES 362
           QEKGLRIAWQY+KYF ENQ N +++KD+ +E+CN+FDLRKPL+      Q +DC SI +S
Sbjct: 120 QEKGLRIAWQYKKYFSENQKNIDDHKDSNQEFCNDFDLRKPLEKHFYSGQRVDCVSIKDS 179

Query: 363 PNLTAFRDRCSTFLAQVPRND 425
           PNL    DRC+TFLAQ PRND
Sbjct: 180 PNLATLHDRCATFLAQFPRND 200


>ref|XP_002533644.1| conserved hypothetical protein [Ricinus communis]
           gi|223526457|gb|EEF28732.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  205 bits (522), Expect = 3e-51
 Identities = 94/143 (65%), Positives = 113/143 (79%)
 Frame = +3

Query: 3   MEDGEAPHHLLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETE 182
           MED EAPHH+LLLRNFMSQGL+ NQPLLY+SPS +P+ FLGTLPSP S KDDK R    E
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLIQNQPLLYSSPSKEPRVFLGTLPSPSSSKDDKLRKHHPE 119

Query: 183 QEKGLRIAWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKPLKVPSLGAQHIDCFSILES 362
           +EKGLRIAWQY+KYFGENQ   + ++D+K+E+CN+FDLRKPL+      Q +DC S+ +S
Sbjct: 120 EEKGLRIAWQYKKYFGENQQTFDGHRDSKQEFCNDFDLRKPLERHFFSGQRVDCVSVNDS 179

Query: 363 PNLTAFRDRCSTFLAQVPRNDKG 431
           PNL   +DRCS FLAQ PRND G
Sbjct: 180 PNLATLQDRCSAFLAQFPRNDGG 202


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/141 (69%), Positives = 115/141 (81%)
 Frame = +3

Query: 3   MEDGEAPHHLLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETE 182
           MED EAPHH+LLLRNFMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S   + E
Sbjct: 60  MEDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPE 119

Query: 183 QEKGLRIAWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKPLKVPSLGAQHIDCFSILES 362
           QEKGLRIAWQY+KYFGE+Q N ++++D K EYCN+FDLRKPL+   L AQ+I C SI + 
Sbjct: 120 QEKGLRIAWQYKKYFGEHQPNFDSHRDTKHEYCNDFDLRKPLERXFLTAQNICCLSIQDP 179

Query: 363 PNLTAFRDRCSTFLAQVPRND 425
           PNL A RD C+ FLAQ  RN+
Sbjct: 180 PNLAAXRDCCAKFLAQFSRNN 200


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  204 bits (518), Expect = 8e-51
 Identities = 100/143 (69%), Positives = 117/143 (81%), Gaps = 2/143 (1%)
 Frame = +3

Query: 3   MEDGEAPHHLLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKS--RGPE 176
           MED EAPHH+LLLRNFMSQGLVHNQPLLYASPS DP++FLGTLPSPV  KDD+S  R PE
Sbjct: 57  MEDTEAPHHMLLLRNFMSQGLVHNQPLLYASPSKDPRAFLGTLPSPVLSKDDRSHNRDPE 116

Query: 177 TEQEKGLRIAWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKPLKVPSLGAQHIDCFSIL 356
             QEKGLRIAWQY+KYFGE++ N ++++D K EYCN+FDLRKPL+   L AQ+I C SI 
Sbjct: 117 QLQEKGLRIAWQYKKYFGEHRPNFDSHRDTKHEYCNDFDLRKPLERYFLTAQNICCLSIQ 176

Query: 357 ESPNLTAFRDRCSTFLAQVPRND 425
           + PNL AFRD C+ FLAQ  RN+
Sbjct: 177 DPPNLAAFRDCCAKFLAQFSRNN 199


>ref|XP_004143437.1| PREDICTED: elongator complex protein 4-like [Cucumis sativus]
           gi|449496395|ref|XP_004160123.1| PREDICTED: elongator
           complex protein 4-like [Cucumis sativus]
          Length = 362

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/141 (67%), Positives = 115/141 (81%)
 Frame = +3

Query: 3   MEDGEAPHHLLLLRNFMSQGLVHNQPLLYASPSNDPKSFLGTLPSPVSPKDDKSRGPETE 182
           MED EAPHH+LLLRNFMSQGLVH+QPLLYASPS DP+ FLGTLPSP + KDDKSR   TE
Sbjct: 60  MEDAEAPHHMLLLRNFMSQGLVHDQPLLYASPSRDPRGFLGTLPSPGASKDDKSRDNSTE 119

Query: 183 QEKGLRIAWQYRKYFGENQLNNENNKDAKKEYCNEFDLRKPLKVPSLGAQHIDCFSILES 362
           QEKGLRIAWQY+KYFG++Q  + N  D+K E+CN+FDLR+P        +H++C SIL+S
Sbjct: 120 QEKGLRIAWQYKKYFGDDQ-ESANAIDSKYEFCNDFDLRRPFDRHFFSGKHVECVSILDS 178

Query: 363 PNLTAFRDRCSTFLAQVPRND 425
            +L+  RDRC+TFL+QVPRND
Sbjct: 179 SSLSTLRDRCATFLSQVPRND 199


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