BLASTX nr result

ID: Coptis25_contig00032021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032021
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selag...    66   5e-14
ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Sela...    66   5e-14
ref|XP_001766902.1| predicted protein [Physcomitrella patens sub...    70   5e-14
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...    70   5e-14
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela...    70   5e-14

>ref|XP_002979723.1| hypothetical protein SELMODRAFT_13030 [Selaginella moellendorffii]
           gi|300152483|gb|EFJ19125.1| hypothetical protein
           SELMODRAFT_13030 [Selaginella moellendorffii]
          Length = 360

 Score = 66.2 bits (160), Expect(3) = 5e-14
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = +3

Query: 252 VVDIYINRENKYAILEMRSVALASNAMVLDGIIF*GTPVRIRRPGDYN 395
           VV++YIN+E K+A +EMR+V  ASNAM LDGI F G  VR+RRP DYN
Sbjct: 68  VVNVYINQEKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDYN 115



 Score = 30.0 bits (66), Expect(3) = 5e-14
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 395 PGLAADLGPSQPSCYLKLEAINRETFAANG 484
           P +AA+LGPSQPS  L L A+     A  G
Sbjct: 116 PSVAANLGPSQPSPSLNLAAVGLTPGAGGG 145



 Score = 26.2 bits (56), Expect(3) = 5e-14
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 91  LLLKQRILAIFCSVMVGIGAYFTGPGLFTLNV 186
           L+ +Q I   F  VMV +G    GPG   +NV
Sbjct: 40  LVNEQTIATFFNQVMVNVGGNTAGPGDVVVNV 71


>ref|XP_002988368.1| hypothetical protein SELMODRAFT_235524 [Selaginella moellendorffii]
           gi|300143770|gb|EFJ10458.1| hypothetical protein
           SELMODRAFT_235524 [Selaginella moellendorffii]
          Length = 353

 Score = 66.2 bits (160), Expect(3) = 5e-14
 Identities = 31/48 (64%), Positives = 38/48 (79%)
 Frame = +3

Query: 252 VVDIYINRENKYAILEMRSVALASNAMVLDGIIF*GTPVRIRRPGDYN 395
           VV++YIN+E K+A +EMR+V  ASNAM LDGI F G  VR+RRP DYN
Sbjct: 61  VVNVYINQEKKFAFVEMRTVEEASNAMALDGISFQGVSVRVRRPSDYN 108



 Score = 30.0 bits (66), Expect(3) = 5e-14
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 395 PGLAADLGPSQPSCYLKLEAINRETFAANG 484
           P +AA+LGPSQPS  L L A+     A  G
Sbjct: 109 PSVAANLGPSQPSPSLNLAAVGLTPGAGGG 138



 Score = 26.2 bits (56), Expect(3) = 5e-14
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 91  LLLKQRILAIFCSVMVGIGAYFTGPGLFTLNV 186
           L+ +Q I   F  VMV +G    GPG   +NV
Sbjct: 33  LVNEQTIATFFNQVMVNVGGNTAGPGDVVVNV 64


>ref|XP_001766902.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162681881|gb|EDQ68304.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 486

 Score = 70.1 bits (170), Expect(2) = 5e-14
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +3

Query: 249 AVVDIYINRENKYAILEMRSVALASNAMVLDGIIF*GTPVRIRRPGDYN 395
           AVV++YIN+E K+A +EMR+V  ASNAM LDGIIF G  VR+RRP DYN
Sbjct: 194 AVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYN 242



 Score = 32.7 bits (73), Expect(2) = 5e-14
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 395 PGLAADLGPSQPSCYLKLEAINRETFAANG 484
           P +AA LGPSQPS +L L A+     AA G
Sbjct: 243 PSMAATLGPSQPSPHLNLAAVGLTPGAAGG 272


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
           gi|300142484|gb|EFJ09184.1| hypothetical protein
           SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score = 70.1 bits (170), Expect(2) = 5e-14
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +3

Query: 249 AVVDIYINRENKYAILEMRSVALASNAMVLDGIIF*GTPVRIRRPGDYN 395
           AVV++YIN+E K+A +EMR+V  ASNAM LDGIIF G  VR+RRP DYN
Sbjct: 100 AVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYN 148



 Score = 32.7 bits (73), Expect(2) = 5e-14
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 395 PGLAADLGPSQPSCYLKLEAINRETFAANG 484
           P +AA LGPSQPS +L L A+     AA G
Sbjct: 149 PSMAATLGPSQPSPHLNLAAVGLTPGAAGG 178


>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
           gi|300140455|gb|EFJ07178.1| hypothetical protein
           SELMODRAFT_161898 [Selaginella moellendorffii]
          Length = 420

 Score = 70.1 bits (170), Expect(2) = 5e-14
 Identities = 33/49 (67%), Positives = 40/49 (81%)
 Frame = +3

Query: 249 AVVDIYINRENKYAILEMRSVALASNAMVLDGIIF*GTPVRIRRPGDYN 395
           AVV++YIN+E K+A +EMR+V  ASNAM LDGIIF G  VR+RRP DYN
Sbjct: 100 AVVNVYINQEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYN 148



 Score = 32.7 bits (73), Expect(2) = 5e-14
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 395 PGLAADLGPSQPSCYLKLEAINRETFAANG 484
           P +AA LGPSQPS +L L A+     AA G
Sbjct: 149 PSMAATLGPSQPSPHLNLAAVGLTPGAAGG 178


Top