BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032014
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36559.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   145   3e-33
ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ...   135   3e-30

>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/90 (80%), Positives = 78/90 (86%)
 Frame = +3

Query: 3   LPYVKSLFLGWFEPLKEAIAKEHKFQENKKQKAAYAQHIGLLPADKMAVIVMHKMMGLLM 182
           LPYVK+LFLGWFEPL+EAI KE + Q  KKQKAAYA HI LLPADKMAVIVMHKMMGL+M
Sbjct: 10  LPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVM 69

Query: 183 NGQDDGCVRVVQAAVHIGEAIENEVRIHSF 272
            G ++GCVRVVQAAV IG AIE EVRIHSF
Sbjct: 70  MGHEEGCVRVVQAAVQIGMAIEQEVRIHSF 99


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/90 (80%), Positives = 78/90 (86%)
 Frame = +3

Query: 3   LPYVKSLFLGWFEPLKEAIAKEHKFQENKKQKAAYAQHIGLLPADKMAVIVMHKMMGLLM 182
           LPYVK+LFLGWFEPL+EAI KE + Q  KKQKAAYA HI LLPADKMAVIVMHKMMGL+M
Sbjct: 181 LPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAPHIELLPADKMAVIVMHKMMGLVM 240

Query: 183 NGQDDGCVRVVQAAVHIGEAIENEVRIHSF 272
            G ++GCVRVVQAAV IG AIE EVRIHSF
Sbjct: 241 MGHEEGCVRVVQAAVQIGMAIEQEVRIHSF 270


>ref|XP_002308414.1| predicted protein [Populus trichocarpa] gi|222854390|gb|EEE91937.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = +3

Query: 3   LPYVKSLFLGWFEPLKEAIAKEHKFQENKKQKAAYAQHIGLLPADKMAVIVMHKMMGLLM 182
           LPYVKSLFLGWFEPLKEAI +E K +++KKQK+A++ +I LLPADKMAVIVMHKMMGL+M
Sbjct: 183 LPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLVM 242

Query: 183 NGQDDGCVRVVQAAVHIGEAIENEVRIHSF 272
            G +DGCVRVVQAAV IG AIE EVRIH+F
Sbjct: 243 VGHEDGCVRVVQAAVQIGIAIEQEVRIHNF 272


>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/90 (76%), Positives = 78/90 (86%)
 Frame = +3

Query: 3   LPYVKSLFLGWFEPLKEAIAKEHKFQENKKQKAAYAQHIGLLPADKMAVIVMHKMMGLLM 182
           LPYVK L LGWFEPLKEAI KE K +++KKQK+A++ +I LLPADKMAVIVMHKMMGLLM
Sbjct: 83  LPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNIELLPADKMAVIVMHKMMGLLM 142

Query: 183 NGQDDGCVRVVQAAVHIGEAIENEVRIHSF 272
            G +DGCVRVVQAAV IG AIE EVRIH+F
Sbjct: 143 VGHEDGCVRVVQAAVQIGMAIEQEVRIHNF 172


>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
           [Ricinus communis] gi|223532193|gb|EEF33998.1|
           DNA-directed RNA polymerase 3B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 1000

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/90 (74%), Positives = 73/90 (81%)
 Frame = +3

Query: 3   LPYVKSLFLGWFEPLKEAIAKEHKFQENKKQKAAYAQHIGLLPADKMAVIVMHKMMGLLM 182
           LPYVK LFLGWFEPLKE I  E   Q +KK KAA+A HI LLPADKMAVIVMHKM+GLLM
Sbjct: 188 LPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFAPHIELLPADKMAVIVMHKMVGLLM 247

Query: 183 NGQDDGCVRVVQAAVHIGEAIENEVRIHSF 272
            G +DGCV +VQAAV IG AIE EVRIH+F
Sbjct: 248 VGHEDGCVPLVQAAVQIGMAIEQEVRIHNF 277