BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00032001
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]   183   7e-44
ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Rici...   138   3e-30
gb|ABK25333.1| unknown [Picea sitchensis]                             122   1e-25
gb|AFK44686.1| unknown [Lotus japonicus]                              116   8e-24
ref|XP_002325888.1| predicted protein [Populus trichocarpa] gi|2...   116   8e-24

>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score =  183 bits (464), Expect = 7e-44
 Identities = 107/262 (40%), Positives = 147/262 (56%), Gaps = 3/262 (1%)
 Frame = -3

Query: 931 PSQLLFTPLMISMVGIVSTALAILLYNIILTKYCVRRQGTMSRP---AQQSVMGVGVDEK 761
           P   +FTPL+ISMVGI+ T+L I++Y++++ KYC+RRQ    RP   A +  +  GVD K
Sbjct: 10  PHASIFTPLLISMVGILGTSLVIVVYHLVIVKYCLRRQAD-PRPLLSAPRXRLSTGVDAK 68

Query: 760 VLDSIPILAYKAEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSH 581
           +L++IPIL+Y  ++G LF  DQ+ECAVCL E  + + VRLLP+C HAFH+ CIDEWF  H
Sbjct: 69  ILETIPILSYSKKKGLLFHADQSECAVCLAELEDDDXVRLLPSCHHAFHITCIDEWFVGH 128

Query: 580 SSCPTCRSPIVAPLVSSEISWPLGESVADDSGTSDHDEDVSDSFVRDESGSNRLLRHCAS 401
           ++CP CRSP+ A L    +S  + E    +  T+      S+      S     LRHC S
Sbjct: 129 TNCPLCRSPVTAVL---SLSNAIEEGNGFNRPTAQFQHQRSNG-----SDLGLQLRHCES 180

Query: 400 VALPNEVRLTSKEVVLKRSMSFDCSYVSIKIQKDIAARDXXXXXXXXXXXXXXXXXSKYK 221
             L  + +       LKRS+S   SYV I IQ++                        YK
Sbjct: 181 CVLHMDGKPRPVMAGLKRSLSMGQSYVIIDIQRE------SERASSSSSKAILGRSRSYK 234

Query: 220 IGSSRRLDRVSSMLMKSYLRLQ 155
             S R+LDR SS L +SY RL+
Sbjct: 235 ARSMRQLDRASSTLRRSYSRLR 256


>ref|XP_002519430.1| RING-H2 finger protein ATL3C, putative [Ricinus communis]
           gi|223541293|gb|EEF42844.1| RING-H2 finger protein
           ATL3C, putative [Ricinus communis]
          Length = 329

 Score =  138 bits (347), Expect = 3e-30
 Identities = 101/321 (31%), Positives = 150/321 (46%), Gaps = 55/321 (17%)
 Frame = -3

Query: 943 PQSQPSQLLFTPLMISMVGIVSTALAILLYNIILTKYCVRRQGTMSR------PAQQSVM 782
           P SQP  L  +PL++S+  +   ++ I  Y+++L ++C+RR+ +++       P Q+  M
Sbjct: 6   PPSQPQGLFVSPLLVSLSIVGCVSMIIAAYHLLLVRFCIRRRRSITTNDSFTIPVQE--M 63

Query: 781 GVGVDEKVLDSIPILAYKAEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCI 602
             GV+E VL +IPIL Y   +      DQTEC +CLGE  +G+ VR LPNC H FHV CI
Sbjct: 64  RTGVEEDVLKAIPILLYSKVDH-----DQTECVICLGELEDGDKVRSLPNCGHVFHVPCI 118

Query: 601 DEWFFSHSSCPTCRSPIVA-----------PLVSSEISWPLGESVADDSGTSDHDEDVSD 455
           D W  +H++CP CR+PIV+           P     I+  L ES + + G  + +     
Sbjct: 119 DGWLSAHTNCPICRAPIVSSPPPPAAAASTPNSDHHITSVLRESPSINIGRRERNTQNLA 178

Query: 454 SFVR--DESG------------------------SNRLLRHCASVALPNEVRLTSKEVVL 353
            F+   DE G                        S R L H  S+ LP E +  S    L
Sbjct: 179 QFLEQGDEDGTSTSTGISTNSVNASTAAAAASLQSTRKLLHSLSLVLPVEGKQQS-FTKL 237

Query: 352 KRSMSFDCSYVSIKIQKD------------IAARDXXXXXXXXXXXXXXXXXSKYKIGSS 209
           KRS+S D  +V I IQ +             +A                     Y+  S 
Sbjct: 238 KRSLSMDQCFVIIDIQAESDDHEKASSSCSSSASSSSPSKCDSSLKGISAENRTYRAISM 297

Query: 208 RRLDRVSSMLMKSYLRLQSNQ 146
           R+LDRVSS L++S+ +++  Q
Sbjct: 298 RQLDRVSSRLLRSFSQIRFGQ 318


>gb|ABK25333.1| unknown [Picea sitchensis]
          Length = 413

 Score =  122 bits (307), Expect = 1e-25
 Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 22/209 (10%)
 Frame = -3

Query: 979 SCQ*YDQMGDKEPQSQPSQLLFTPLMISMVGIVSTALAILLYNIILTKYCVRRQGTMSR- 803
           SC  +      E  ++ S   F+PL+I+++GI+++A  ++ Y  IL KYC       SR 
Sbjct: 34  SCYPFSPPPPFELGNRDSDPTFSPLVIAIIGILASAFLLVFYYAILAKYCTSWDSFRSRM 93

Query: 802 -----------------PAQQS--VMGVGVDEKVLDSIPILAYKAEEGGLFRVDQTECAV 680
                            P+  S  ++ VG++E  + SIP+  YK  +G    VD T+C+V
Sbjct: 94  RGGGYNDSYEDEDHNLTPSNDSWPLVTVGLEESTIRSIPVYKYKRGDG---LVDCTDCSV 150

Query: 679 CLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHSSCPTCRSPIVAPLVS--SEISWPLGE 506
           CL EF+E + VRLLP C HAFHV CID W  SHS+CP CR+ IV+P  S   E +  + +
Sbjct: 151 CLSEFHEDDSVRLLPKCNHAFHVPCIDTWLNSHSNCPLCRANIVSPAASLPVEAAITIHD 210

Query: 505 SVADDSGTSDHDEDVSDSFVRDESGSNRL 419
             +D +  +    D  +  +R+E  S+ L
Sbjct: 211 EGSDTTAVAQTPNDNHEQNLREEPMSSSL 239


>gb|AFK44686.1| unknown [Lotus japonicus]
          Length = 302

 Score =  116 bits (291), Expect = 8e-24
 Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 15/158 (9%)
 Frame = -3

Query: 958 MGDKEPQSQPSQLL-FTPLMISMVGIVSTALAILLYNIILTKYCVRRQGTMSRPAQQSVM 782
           +GD +P    S    F+PL+++++GI+++   ++ Y  I++++C RR+G  +    Q+  
Sbjct: 47  LGDDDPDGGDSSAFEFSPLVVAVIGILASTFILVTYYSIISRFCRRRRGNPTDAFSQTDH 106

Query: 781 G--------------VGVDEKVLDSIPILAYKAEEGGLFRVDQTECAVCLGEFNEGEVVR 644
           G               G+DE ++ SI +  Y     GL  V+ ++C+VCL EF E E +R
Sbjct: 107 GHGGDADAGHLPSSSSGLDESLIKSITVFKYSKGNNGLV-VEGSDCSVCLSEFQENESLR 165

Query: 643 LLPNCRHAFHVKCIDEWFFSHSSCPTCRSPIVAPLVSS 530
           LLP C HAFH+ CID W  SHSSCP CRS I AP+++S
Sbjct: 166 LLPKCNHAFHLPCIDPWLKSHSSCPLCRSNI-APVITS 202


>ref|XP_002325888.1| predicted protein [Populus trichocarpa] gi|222862763|gb|EEF00270.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  116 bits (291), Expect = 8e-24
 Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 20/182 (10%)
 Frame = -3

Query: 913 TPLMISMVGIVSTALAILLYNIILTKYCVRR------------QGTMSRPAQQSVMGVGV 770
           +PL I+ +GI+++A  ++ Y+ +++KYC RR            Q  M   A Q + G G+
Sbjct: 55  SPLTIAFIGILASAFILVTYHTLVSKYCSRRGHGNDTTELNDNQDQMGNEASQGIPG-GL 113

Query: 769 DEKVLDSIPILAYKAEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWF 590
           DE VL SI I  YK  +G    V+ T+C+VCLGEF E E +R LP C HAFH+ CID W 
Sbjct: 114 DEAVLKSITICKYKKGDGF---VEGTDCSVCLGEFQENESLRRLPKCSHAFHLLCIDTWL 170

Query: 589 FSHSSCPTCRSPI-----VAPLVSSEISWPLGESV-ADDSGTSDHDEDVSDS--FVRDES 434
            SH+SCP CR+ I     V P   +  + P+ E++ + ++ T  + +  +D+   ++D  
Sbjct: 171 KSHASCPLCRANIADPANVLPSAQAPPAVPVQENLPSSNASTLQYQQRTNDAVLVIQDLE 230

Query: 433 GS 428
           GS
Sbjct: 231 GS 232