BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031994
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EIE25472.1| DEAD-box RNA helicase [Coccomyxa subellipsoidea C...    69   2e-18
dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileri...    61   1e-15
gb|AFZ81341.1| DEAD box ATP-dependent RNA helicase family member...    61   2e-15
ref|XP_002777392.1| RNA helicase, putative [Perkinsus marinus AT...    67   3e-15
ref|XP_002777393.1| RNA helicase, putative [Perkinsus marinus AT...    67   3e-15

>gb|EIE25472.1| DEAD-box RNA helicase [Coccomyxa subellipsoidea C-169]
          Length = 461

 Score = 68.6 bits (166), Expect(2) = 2e-18
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = -2

Query: 261 CH*TAENLRLNGWPALSILGDNAQSERDWVRAEFKSDRSLIMIATDVDARGL 106
           C      LR  GWPALSI GD +Q ERDWV AEFK+ +S IM+ATDV ARGL
Sbjct: 301 CDAVTRQLRTEGWPALSIHGDKSQQERDWVLAEFKAGKSPIMLATDVAARGL 352



 Score = 48.5 bits (114), Expect(2) = 2e-18
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -3

Query: 338 LIKLLNELMDGSRILIFVETKKGCDHVTRQLR 243
           L +LL   MDGSR+LIF ETK+GCD VTRQLR
Sbjct: 278 LSRLLEREMDGSRLLIFCETKRGCDAVTRQLR 309


>dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileria orientalis strain
           Shintoku]
          Length = 587

 Score = 60.8 bits (146), Expect(2) = 1e-15
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -2

Query: 240 LRLNGWPALSILGDNAQSERDWVRAEFKSDRSLIMIATDVDARGL 106
           LRL+GWPAL I GD  Q ER WV +EFK+ +  IMIATDV +RGL
Sbjct: 416 LRLDGWPALCIHGDKKQEERSWVLSEFKAGKHPIMIATDVASRGL 460



 Score = 47.0 bits (110), Expect(2) = 1e-15
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = -3

Query: 338 LIKLLNELMDGSRILIFVETKKGCDHVTRQLRI 240
           L +LL +LMDGS+ILIF ETKKG D +TR+LR+
Sbjct: 386 LKELLKKLMDGSKILIFAETKKGADTLTRELRL 418


>gb|AFZ81341.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
           equi]
          Length = 518

 Score = 60.8 bits (146), Expect(2) = 2e-15
 Identities = 30/45 (66%), Positives = 34/45 (75%)
 Frame = -2

Query: 240 LRLNGWPALSILGDNAQSERDWVRAEFKSDRSLIMIATDVDARGL 106
           LRL+GWPALSI GD  Q ER+WV  EFK  +  IMIATDV +RGL
Sbjct: 369 LRLDGWPALSIHGDKKQEERNWVLNEFKLGKHPIMIATDVASRGL 413



 Score = 46.2 bits (108), Expect(2) = 2e-15
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -3

Query: 338 LIKLLNELMDGSRILIFVETKKGCDHVTRQLRI 240
           L  LL +LMDGS+ILIF ETKKG D +TR+LR+
Sbjct: 339 LKNLLPKLMDGSKILIFTETKKGADSLTRELRL 371


>ref|XP_002777392.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
           gi|239885023|gb|EER09208.1| RNA helicase, putative
           [Perkinsus marinus ATCC 50983]
          Length = 531

 Score = 66.6 bits (161), Expect(2) = 3e-15
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -2

Query: 240 LRLNGWPALSILGDNAQSERDWVRAEFKSDRSLIMIATDVDARGL 106
           LR++GWPALSI GD  Q ERDWV  EFKS +S IMIATDV +RGL
Sbjct: 383 LRMDGWPALSIHGDKKQEERDWVLQEFKSGKSPIMIATDVASRGL 427



 Score = 39.7 bits (91), Expect(2) = 3e-15
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -3

Query: 338 LIKLLNELMDGSRILIFVETKKGCDHVTRQLRI*D*MDG 222
           L +LL  +MDGS+I+IF +TK+  D +TR LR    MDG
Sbjct: 353 LKQLLERIMDGSKIVIFTDTKRAADDLTRMLR----MDG 387


>ref|XP_002777393.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
           gi|239885024|gb|EER09209.1| RNA helicase, putative
           [Perkinsus marinus ATCC 50983]
          Length = 515

 Score = 66.6 bits (161), Expect(2) = 3e-15
 Identities = 32/45 (71%), Positives = 36/45 (80%)
 Frame = -2

Query: 240 LRLNGWPALSILGDNAQSERDWVRAEFKSDRSLIMIATDVDARGL 106
           LR++GWPALSI GD  Q ERDWV  EFKS +S IMIATDV +RGL
Sbjct: 367 LRMDGWPALSIHGDKKQEERDWVLQEFKSGKSPIMIATDVASRGL 411



 Score = 39.7 bits (91), Expect(2) = 3e-15
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -3

Query: 338 LIKLLNELMDGSRILIFVETKKGCDHVTRQLRI*D*MDG 222
           L +LL  +MDGS+I+IF +TK+  D +TR LR    MDG
Sbjct: 337 LKQLLERIMDGSKIVIFTDTKRAADDLTRMLR----MDG 371