BLASTX nr result

ID: Coptis25_contig00031983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031983
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276519.1| PREDICTED: TPR repeat-containing thioredoxin...   261   2e-67
emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]   261   2e-67
emb|CBI21978.3| unnamed protein product [Vitis vinifera]              258   2e-66
ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-c...   249   5e-64
ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin...   249   5e-64

>ref|XP_002276519.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
            vinifera]
          Length = 710

 Score =  261 bits (667), Expect = 2e-67
 Identities = 158/325 (48%), Positives = 186/325 (57%), Gaps = 6/325 (1%)
 Frame = +3

Query: 3    ESSPTAVDSIRS-AVTRDSNKLGGGHKRSVSTASGNTIPPLIYXXXXXXXXXXXXXXXXX 179
            E+SP A +++RS A TR+S     GH+RS S       PPLIY                 
Sbjct: 96   ETSPYASETLRSVAGTRNSRP---GHRRSSSAG-----PPLIYSGASFVSSSNGGCSGGG 147

Query: 180  XXXXXXXXXXXPIVNALPAGNICPSGKILKTGMAARSSSRKDVLGSGTGNYGHGSIVRGP 359
                       P  N LP+GNICPSGKILK GM  RSS R DVLGSGTG+YGHGSI+RG 
Sbjct: 148  ASSISSN----PNANVLPSGNICPSGKILKAGMPCRSSGRSDVLGSGTGHYGHGSIMRGG 203

Query: 360  VCVKXXXXXXXXXXXXXXXX-----MVKRALVSFDIEVVTRVGNEQYKKGHFSEALCLYD 524
              +                      MVKRA+ S D E V + GNE Y++G F+EAL LYD
Sbjct: 204  AKLSSPRSIADVNMTGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLYD 263

Query: 525  RAIAISPDNAACRSNXXXXXXXXXXXXXXXXXXXXXXXXDPGYSRAHQRLASLHLRLGQI 704
            RAI++SPDNAA RSN                        DPGY RAHQRLASL+LRLGQ+
Sbjct: 264  RAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLRLGQV 323

Query: 705  ENARQHLCFCGLQPDKVELQNLQLVERHLNRCFDARRIGDWKSAMREXXXXXXXXXXXXP 884
            ENAR+HL   G  PD  ELQ L  +E+HLNRC DAR+IGDWKSA+RE            P
Sbjct: 324  ENARRHLFLPGQPPDPSELQKLLSLEKHLNRCADARKIGDWKSALRECDAAIAGGADSSP 383

Query: 885  QLFACRAEALLKLHQLVDADAGLSN 959
            QL +CRAEALLKLHQ+ DAD+ LS+
Sbjct: 384  QLISCRAEALLKLHQIEDADSCLSS 408


>emb|CAN62839.1| hypothetical protein VITISV_003392 [Vitis vinifera]
          Length = 815

 Score =  261 bits (667), Expect = 2e-67
 Identities = 159/325 (48%), Positives = 187/325 (57%), Gaps = 6/325 (1%)
 Frame = +3

Query: 3    ESSPTAVDSIRS-AVTRDSNKLGGGHKRSVSTASGNTIPPLIYXXXXXXXXXXXXXXXXX 179
            E+SP A +++RS A TR+S     GH+RS S       PPLIY                 
Sbjct: 106  ETSPYASETLRSVAGTRNSRP---GHRRSSSAG-----PPLIYSGASFVSSSNGGCSGGG 157

Query: 180  XXXXXXXXXXXPIVNALPAGNICPSGKILKTGMAARSSSRKDVLGSGTGNYGHGSIVRGP 359
                       P  N LP+GNICPSGKILK GM  RSS R DVLGSGTG+YGHGSI+RG 
Sbjct: 158  ASXISSN----PNANVLPSGNICPSGKILKAGMPCRSSGRSDVLGSGTGHYGHGSIMRGG 213

Query: 360  VCVKXXXXXXXXXXXXXXXX-----MVKRALVSFDIEVVTRVGNEQYKKGHFSEALCLYD 524
              +                      MVKRA+ S D E V + GNE Y++G F+EAL LYD
Sbjct: 214  AKLSSPRSIADVNMTGNIQFAGESVMVKRAMGSSDPEEVKKAGNELYRRGSFTEALSLYD 273

Query: 525  RAIAISPDNAACRSNXXXXXXXXXXXXXXXXXXXXXXXXDPGYSRAHQRLASLHLRLGQI 704
            RAI++SPDNAA RSN                        DPGY RAHQRLASL+LRLGQ+
Sbjct: 274  RAISLSPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLRLGQV 333

Query: 705  ENARQHLCFCGLQPDKVELQNLQLVERHLNRCFDARRIGDWKSAMREXXXXXXXXXXXXP 884
            ENAR+HL   G  PD  ELQ L  +E+HLNRC DAR+IGDWKSA+RE            P
Sbjct: 334  ENARRHLFLPGQPPDPSELQKLLSLEKHLNRCADARKIGDWKSALRECDAAIAGGADSSP 393

Query: 885  QLFACRAEALLKLHQLVDADAGLSN 959
            QL +CRAEALLKLHQ+ DAD+ LS+
Sbjct: 394  QLISCRAEALLKLHQIEDADSCLSS 418


>emb|CBI21978.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  258 bits (658), Expect = 2e-66
 Identities = 155/320 (48%), Positives = 184/320 (57%), Gaps = 1/320 (0%)
 Frame = +3

Query: 3   ESSPTAVDSIRS-AVTRDSNKLGGGHKRSVSTASGNTIPPLIYXXXXXXXXXXXXXXXXX 179
           E+SP A +++RS A TR+S     GH+RS S       PPLIY                 
Sbjct: 78  ETSPYASETLRSVAGTRNSRP---GHRRSSSAG-----PPLIYSGASFVSSSNGGCSGGG 129

Query: 180 XXXXXXXXXXXPIVNALPAGNICPSGKILKTGMAARSSSRKDVLGSGTGNYGHGSIVRGP 359
                      P  N LP+GNICPSGKILK GM  RSS R DVLGSGTG+YGHGSI+RG 
Sbjct: 130 ASSISSN----PNANVLPSGNICPSGKILKAGMPCRSSGRSDVLGSGTGHYGHGSIMRGG 185

Query: 360 VCVKXXXXXXXXXXXXXXXXMVKRALVSFDIEVVTRVGNEQYKKGHFSEALCLYDRAIAI 539
             +                 +  RA+ S D E V + GNE Y++G F+EAL LYDRAI++
Sbjct: 186 AKLSSPRS------------IADRAMGSSDPEEVKKAGNELYRRGSFTEALSLYDRAISL 233

Query: 540 SPDNAACRSNXXXXXXXXXXXXXXXXXXXXXXXXDPGYSRAHQRLASLHLRLGQIENARQ 719
           SPDNAA RSN                        DPGY RAHQRLASL+LRLGQ+ENAR+
Sbjct: 234 SPDNAAYRSNRAAALTALGKLAEAVKECEEAVRLDPGYGRAHQRLASLYLRLGQVENARR 293

Query: 720 HLCFCGLQPDKVELQNLQLVERHLNRCFDARRIGDWKSAMREXXXXXXXXXXXXPQLFAC 899
           HL   G  PD  ELQ L  +E+HLNRC DAR+IGDWKSA+RE            PQL +C
Sbjct: 294 HLFLPGQPPDPSELQKLLSLEKHLNRCADARKIGDWKSALRECDAAIAGGADSSPQLISC 353

Query: 900 RAEALLKLHQLVDADAGLSN 959
           RAEALLKLHQ+ DAD+ LS+
Sbjct: 354 RAEALLKLHQIEDADSCLSS 373


>ref|XP_004171005.1| PREDICTED: LOW QUALITY PROTEIN: TPR repeat-containing thioredoxin
           TTL1-like [Cucumis sativus]
          Length = 698

 Score =  249 bits (637), Expect = 5e-64
 Identities = 155/323 (47%), Positives = 181/323 (56%), Gaps = 6/323 (1%)
 Frame = +3

Query: 3   ESSPTAVDSIRSAVTRDSNKLGGGHKRSVSTASGNTIPPLIYXXXXXXXXXXXXXXXXXX 182
           ESSPTA +S+RS  T  + K   GH RS S ++     PLIY                  
Sbjct: 96  ESSPTAAESLRSIGTPKNFK--SGHNRSDSASNH----PLIYSGQSQSSVTSPS------ 143

Query: 183 XXXXXXXXXXPIVNALPAGNICPSGKILKTGMAARS-SSRKDVLGSGTGNYGHGSIVRGP 359
                        N LP GNICPSG+ILK  M + + SSR DVLGSG+GNYGHGSI+RG 
Sbjct: 144 -------------NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNYGHGSIMRGL 190

Query: 360 VCVKXXXXXXXXXXXXXXXXM-----VKRALVSFDIEVVTRVGNEQYKKGHFSEALCLYD 524
             VK                +     +KRA  S D E + R GNEQYKKGHF+EAL LYD
Sbjct: 191 GGVKTGAVESISNACSRVGGVGGGDSLKRAKQSGDPEELKRAGNEQYKKGHFAEALSLYD 250

Query: 525 RAIAISPDNAACRSNXXXXXXXXXXXXXXXXXXXXXXXXDPGYSRAHQRLASLHLRLGQI 704
           RAIAISP NAA RSN                        DP Y RAHQRLASL  RLGQ+
Sbjct: 251 RAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPNYIRAHQRLASLFRRLGQV 310

Query: 705 ENARQHLCFCGLQPDKVELQNLQLVERHLNRCFDARRIGDWKSAMREXXXXXXXXXXXXP 884
           ENAR+HLCF G+QPD  ELQ LQ+VERH++RC DARR+ DWKS ++E            P
Sbjct: 311 ENARKHLCFPGVQPDPNELQRLQVVERHISRCGDARRVRDWKSVLKEADAAISAGADSSP 370

Query: 885 QLFACRAEALLKLHQLVDADAGL 953
           QLF  R EALLKLHQ+ DA++ L
Sbjct: 371 QLFMSRVEALLKLHQIEDAESSL 393


>ref|XP_004146029.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Cucumis
           sativus]
          Length = 698

 Score =  249 bits (637), Expect = 5e-64
 Identities = 155/323 (47%), Positives = 181/323 (56%), Gaps = 6/323 (1%)
 Frame = +3

Query: 3   ESSPTAVDSIRSAVTRDSNKLGGGHKRSVSTASGNTIPPLIYXXXXXXXXXXXXXXXXXX 182
           ESSPTA +S+RS  T  + K   GH RS S ++     PLIY                  
Sbjct: 96  ESSPTAAESLRSIGTPKNFK--SGHNRSDSASNH----PLIYSGQSQSSVTSPS------ 143

Query: 183 XXXXXXXXXXPIVNALPAGNICPSGKILKTGMAARS-SSRKDVLGSGTGNYGHGSIVRGP 359
                        N LP GNICPSG+ILK  M + + SSR DVLGSG+GNYGHGSI+RG 
Sbjct: 144 -------------NVLPTGNICPSGRILKPSMPSTNRSSRTDVLGSGSGNYGHGSIMRGL 190

Query: 360 VCVKXXXXXXXXXXXXXXXXM-----VKRALVSFDIEVVTRVGNEQYKKGHFSEALCLYD 524
             VK                +     +KRA  S D E + R GNEQYKKGHF+EAL LYD
Sbjct: 191 GGVKTGAVESISNACSRVGGVGGGDSLKRAKQSGDPEELKRAGNEQYKKGHFAEALSLYD 250

Query: 525 RAIAISPDNAACRSNXXXXXXXXXXXXXXXXXXXXXXXXDPGYSRAHQRLASLHLRLGQI 704
           RAIAISP NAA RSN                        DP Y RAHQRLASL  RLGQ+
Sbjct: 251 RAIAISPANAAYRSNRAAALTGLGRLGEAVSECEEAVRLDPNYIRAHQRLASLFRRLGQV 310

Query: 705 ENARQHLCFCGLQPDKVELQNLQLVERHLNRCFDARRIGDWKSAMREXXXXXXXXXXXXP 884
           ENAR+HLCF G+QPD  ELQ LQ+VERH++RC DARR+ DWKS ++E            P
Sbjct: 311 ENARKHLCFPGVQPDPNELQRLQVVERHISRCGDARRVRDWKSVLKEADAAISAGADSSP 370

Query: 885 QLFACRAEALLKLHQLVDADAGL 953
           QLF  R EALLKLHQ+ DA++ L
Sbjct: 371 QLFMSRVEALLKLHQIEDAESSL 393


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