BLASTX nr result

ID: Coptis25_contig00031970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031970
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275748.1| PREDICTED: uncharacterized protein LOC100265...   104   7e-21
emb|CAN65097.1| hypothetical protein VITISV_039722 [Vitis vinifera]   104   9e-21
ref|XP_003548916.1| PREDICTED: uncharacterized protein LOC100778...    90   2e-16
ref|XP_003528437.1| PREDICTED: uncharacterized protein LOC100796...    88   6e-16
ref|XP_003542065.1| PREDICTED: uncharacterized protein LOC100812...    87   1e-15

>ref|XP_002275748.1| PREDICTED: uncharacterized protein LOC100265239 [Vitis vinifera]
           gi|297743028|emb|CBI35895.3| unnamed protein product
           [Vitis vinifera]
          Length = 631

 Score =  104 bits (260), Expect = 7e-21
 Identities = 60/107 (56%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
 Frame = +3

Query: 63  PSSSSN-GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-D 236
           PS   N G     K  G E SSR +L+YL TCFIGL VEVQ+K+GSI SGIFHA NAD D
Sbjct: 37  PSRLPNAGVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKD 96

Query: 237 AGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAK 377
            G+VLKM R  K G V  +   SDSV +   K +IIP++++VQVIAK
Sbjct: 97  FGIVLKMARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAK 143


>emb|CAN65097.1| hypothetical protein VITISV_039722 [Vitis vinifera]
          Length = 511

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/100 (57%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
 Frame = +3

Query: 81  GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-DAGVVLKM 257
           G     K  G E SSR +L+YL TCFIGL VEVQ+K+GSI SGIFHA NAD D G+VLKM
Sbjct: 48  GVFTGTKGGGYESSSRDRLVYLTTCFIGLPVEVQVKNGSIISGIFHATNADKDFGIVLKM 107

Query: 258 VRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAK 377
            R  K G V  +   SDSV +   K +IIP++++VQVIAK
Sbjct: 108 ARLTKDGPVRGQKAISDSVSKAPSKILIIPAKELVQVIAK 147


>ref|XP_003548916.1| PREDICTED: uncharacterized protein LOC100778053 [Glycine max]
          Length = 624

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
 Frame = +3

Query: 60  KPSSSSN----GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALN 227
           K +SSS     G +  NK  G    S  +L+YL TC IG  VEVQ+K+GSI+SGIFHA N
Sbjct: 36  KSNSSSRLAGTGVVTGNKGGGYGSPSHDRLVYLTTCLIGQHVEVQVKNGSIYSGIFHATN 95

Query: 228 AD-DAGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAK 377
           +D D G++LKM R  K  +++ +    + V     KT+IIP+ D+ QVIAK
Sbjct: 96  SDKDFGIILKMARLTKAASLQGQGSGVEFVSEAPSKTLIIPANDLAQVIAK 146


>ref|XP_003528437.1| PREDICTED: uncharacterized protein LOC100796073 [Glycine max]
          Length = 621

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
 Frame = +3

Query: 60  KPSSSSNGSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNA-DD 236
           K ++SS  ++  NK       S  +L+YL TC IG  VEVQ+K+GSI+SGIFHA N+  D
Sbjct: 36  KSNASSRLAMTGNKGGSYGSPSHDRLVYLKTCLIGQHVEVQVKNGSIYSGIFHATNSGKD 95

Query: 237 AGVVLKMVRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAK 377
            G++LKM    K   ++ K    + V +   KT+IIP+ D+VQVIAK
Sbjct: 96  FGIILKMAHLTKDAALQGKESGVEFVSKAPFKTLIIPANDLVQVIAK 142


>ref|XP_003542065.1| PREDICTED: uncharacterized protein LOC100812754 [Glycine max]
          Length = 640

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = +3

Query: 81  GSLDDNKFRGREISSRQKLIYLATCFIGLTVEVQIKSGSIFSGIFHALNAD-DAGVVLKM 257
           G++  +K    E  S  +L+Y+ TC IG  VEVQ+K+GSI+SGIFHA N D D G++LKM
Sbjct: 46  GAVTGSKGGSYESPSHDRLVYVTTCLIGHQVEVQVKNGSIYSGIFHATNTDKDFGIILKM 105

Query: 258 VRFIKCGTVEVKNLASDSVKRRFIKTMIIPSEDIVQVIAK 377
            R  K G++  +   ++ V +  +K +IIP++D+VQV A+
Sbjct: 106 ARLTKDGSLRGQKSGTEFVSKPPLKILIIPAKDLVQVTAQ 145


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