BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031961
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    80   1e-13
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    80   1e-13
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    75   4e-12
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    72   5e-11
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = -1

Query: 260 KWVELKTLCGRAIFLGDNSSFSVSASDFPGCKPDCIYVTDDYHE-GYLGMEEHGVGPHDI 84
           +W  + +L  RA+FLG+N S S+S+ DFPGCK +CIY TDDY E  Y G+     G  D+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG----GEQDL 356

Query: 83  GVFNLEDGTYEPYCPVESGMILPRPIW 3
           G+FNLEDG+ EP       +  P P+W
Sbjct: 357 GIFNLEDGSIEPLPCSHFRIRWPPPLW 383


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = -1

Query: 260 KWVELKTLCGRAIFLGDNSSFSVSASDFPGCKPDCIYVTDDYHE-GYLGMEEHGVGPHDI 84
           +W  + +L  RA+FLG+N S S+S+ DFPGCK +CIY TDDY E  Y G+     G  D+
Sbjct: 301 RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG----GEQDL 356

Query: 83  GVFNLEDGTYEPYCPVESGMILPRPIW 3
           G+FNLEDG+ EP       +  P P+W
Sbjct: 357 GIFNLEDGSIEPLPCSHFRIRWPPPLW 383


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
 Frame = -1

Query: 263 LKWVELKTLCGRAIFLGDNSSFSVSASDFPGCKPDCIYVTDDYHEGYLGMEEHGVGPHDI 84
           L W  ++TL  R +F+G NSS S  ASDF GC  DCIY TDDY E     ++   G HD+
Sbjct: 300 LTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSE---SNDDDACGKHDL 356

Query: 83  GVFNLEDGTYEPYCPVE----SGMILPRPIW 3
           GVF L D + EP         S +  P PIW
Sbjct: 357 GVFRLRDKSIEPLPCFNQNSCSRLRWPLPIW 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/71 (47%), Positives = 48/71 (67%)
 Frame = -1

Query: 260 KWVELKTLCGRAIFLGDNSSFSVSASDFPGCKPDCIYVTDDYHEGYLGMEEHGVGPHDIG 81
           +W+ + TL  +A+F+G+NSS S+SA+DF GC  +CIY TDDY +     + H  G HD+G
Sbjct: 306 QWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDA--NYDGH-FGDHDLG 362

Query: 80  VFNLEDGTYEP 48
           +F L D T EP
Sbjct: 363 IFKLCDETIEP 373


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = -1

Query: 257 WVELKTLCGRAIFLGDNSSFSVSASDFPGCKPDCIYVTDDYHEGYLGMEEHGVGPHDIGV 78
           WV + +L  +A+F+G N S SV   D PGC+ + +Y TDDY E     E++  G HD+GV
Sbjct: 374 WVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWERM--NEDYLYGGHDMGV 431

Query: 77  FNLEDGTYEPYCPVESGMILPRPIW 3
           FNL+D + + +  +++  I P P W
Sbjct: 432 FNLKDKSVKHFYQLDALKIQPPPCW 456