BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031954
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517052.1| RNA binding protein, putative [Ricinus commu...    75   6e-12
emb|CBI39875.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002521144.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
gb|AFK43132.1| unknown [Lotus japonicus]                               70   2e-10
emb|CBI39876.3| unnamed protein product [Vitis vinifera]               69   4e-10

>ref|XP_002517052.1| RNA binding protein, putative [Ricinus communis]
           gi|223543687|gb|EEF45215.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 143

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/88 (45%), Positives = 52/88 (59%)
 Frame = -1

Query: 328 SMDSCLNNVARAFKLSLLLLTIWGCLTVRGALDRVHVRFTNEIRNDVTLHVHCKSKSDDL 149
           ++ SC+N +     L LL+L +  C    G  +R HV   N++    TL+VHCKSK DDL
Sbjct: 3   AVKSCVNVIVL---LVLLILAMGRCCL--GIGERYHVHIINDLTRH-TLNVHCKSKDDDL 56

Query: 148 GEHTLAFNQAFEWGFRNNFWETTLFWCN 65
           G H L   + F + FR NFW TTLFWCN
Sbjct: 57  GPHLLQLGEEFHFTFRVNFWGTTLFWCN 84


>emb|CBI39875.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = -1

Query: 292 FKLSLLLLTIWGCLTVRGAL--DRVHVRFTNEIRNDVTLHVHCKSKSDDLGEHTLAFNQA 119
           F   LL+  +  C    GA+   +VHVR  N++ N   L++HCKSK DDLG H LA +Q 
Sbjct: 9   FSFVLLVFLVRWC---DGAIIEKKVHVRIINDLGNGSDLNLHCKSKDDDLGVHVLAPHQF 65

Query: 118 FEWGFRNNFWETTLFWC 68
           FE+ FR NFW TTL++C
Sbjct: 66  FEFSFRPNFWVTTLYFC 82


>ref|XP_002521144.1| conserved hypothetical protein [Ricinus communis]
           gi|223539713|gb|EEF41295.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -1

Query: 232 DRVHVRFTNEIRNDVTLHVHCKSKSDDLGEHTLAFNQAFEWGFRNNFWETTLFWC 68
           D  +V  TNE+ ++  LHVHCKSK DDLG H L  +Q + W F  NF+ TTLFWC
Sbjct: 22  DPYYVHITNELSHNKVLHVHCKSKDDDLGIHQLPRSQHYSWRFNLNFFATTLFWC 76


>gb|AFK43132.1| unknown [Lotus japonicus]
          Length = 132

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = -1

Query: 292 FKLSLLLLTIWGCLTVRGALDRVHVRFTNEIRNDVTLHVHCKSKSDDLGEHTLAFNQAFE 113
           F  S+LLL +   +      D+VHVR TN +  ++ L +HCKSK DDLG   L  +Q +E
Sbjct: 4   FHKSVLLLCLLLPVVNSAFWDKVHVRVTNYLEGELDLTLHCKSKDDDLGVKVLHQDQFYE 63

Query: 112 WGFRNNFWETTLFWCN 65
           + FR NFW TTLF C+
Sbjct: 64  FSFRPNFWGTTLFHCS 79


>emb|CBI39876.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/54 (51%), Positives = 41/54 (75%)
 Frame = -1

Query: 229 RVHVRFTNEIRNDVTLHVHCKSKSDDLGEHTLAFNQAFEWGFRNNFWETTLFWC 68
           +V +R TN++ N + L++HCKS+ DDLG H LA +Q FE+ FR NFW +TL++C
Sbjct: 45  KVDLRITNDLGNGLDLNLHCKSQDDDLGVHVLASHQFFEFSFRPNFWSSTLYFC 98