BLASTX nr result
ID: Coptis25_contig00031947
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031947 (396 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529506.1| pentatricopeptide repeat-containing protein,... 202 3e-50 ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containi... 201 5e-50 ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containi... 199 1e-49 ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containi... 199 1e-49 ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|2... 199 1e-49 >ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 808 Score = 202 bits (513), Expect = 3e-50 Identities = 97/130 (74%), Positives = 119/130 (91%) Frame = -3 Query: 391 TGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAE 212 +G+ PDVVSYTSLL++YGRS+QP+KARE+F+ +K+ KPN+VS+NALIDAYGS GLLA+ Sbjct: 384 SGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLAD 443 Query: 211 AVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIG 32 AV VLREME DGI PNIVTICTLL+AC RCG++VNID+VLSAA+ RGI+LNT+ACNSAIG Sbjct: 444 AVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIG 503 Query: 31 SYMSLGEYEK 2 SYM++GEYEK Sbjct: 504 SYMNVGEYEK 513 Score = 78.2 bits (191), Expect = 6e-13 Identities = 38/123 (30%), Positives = 70/123 (56%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 RPD+V++TS+++ Y S Q E + +F + P +VSYNALI AY G+ EA+ Sbjct: 317 RPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALS 376 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V ++++ G+ P++V+ +LLS+ R + + + + ++ N ++ N+ I +Y Sbjct: 377 VFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYG 436 Query: 22 SLG 14 S G Sbjct: 437 SNG 439 Score = 65.1 bits (157), Expect = 6e-09 Identities = 41/127 (32%), Positives = 67/127 (52%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 +PD +Y +L+NA+GR+ Q A I + + R + P+ +YN LI+A GS G EA+ Sbjct: 175 KPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALK 234 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V ++M +G+ P++VT +LSA + S + I+ +T N I + Sbjct: 235 VSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLV 294 Query: 22 SLGEYEK 2 LG+ EK Sbjct: 295 KLGQCEK 301 Score = 54.3 bits (129), Expect = 1e-05 Identities = 30/121 (24%), Positives = 58/121 (47%) Frame = -3 Query: 364 YTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVGVLREME 185 Y ++ + R ++AR +F +++ KP+ +YNALI+A+G G A+ ++ +M Sbjct: 146 YNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDML 205 Query: 184 GDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYMSLGEYE 5 + I P+ T L++AC G V G+ + + N + +Y + +Y Sbjct: 206 REAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYS 265 Query: 4 K 2 K Sbjct: 266 K 266 >ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like [Glycine max] Length = 832 Score = 201 bits (511), Expect = 5e-50 Identities = 95/131 (72%), Positives = 117/131 (89%) Frame = -3 Query: 394 KTGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLA 215 + G RPD+VSYTSLLNAYGRSQ+P KAR+IFD++KRN KPNLVSYNALIDAYGS GLLA Sbjct: 391 QNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLA 450 Query: 214 EAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAI 35 +A+ +LREME +GIQPN+V+ICTLL+AC RC R+V ID+VL+AAE RGI+LNT+A N+AI Sbjct: 451 DAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAI 510 Query: 34 GSYMSLGEYEK 2 GS M++GEY+K Sbjct: 511 GSCMNVGEYDK 521 Score = 73.6 bits (179), Expect = 2e-11 Identities = 41/127 (32%), Positives = 69/127 (54%) Frame = -3 Query: 394 KTGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLA 215 K+ PDVV++TS+++ Y Q E F+ + KPN+VSYNALI AY + G+ Sbjct: 321 KSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDN 380 Query: 214 EAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAI 35 EA E++ +G +P+IV+ +LL+A R + + + ++ N ++ N+ I Sbjct: 381 EAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALI 440 Query: 34 GSYMSLG 14 +Y S G Sbjct: 441 DAYGSNG 447 Score = 68.2 bits (165), Expect = 7e-10 Identities = 41/127 (32%), Positives = 68/127 (53%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 +PDV +Y +++NA+GR+ Q A I D + R + P+ +YN LI+A GS G EA+ Sbjct: 183 KPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALN 242 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V ++M +G+ P++VT +LSA + S + I+ +T N I + Sbjct: 243 VCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLV 302 Query: 22 SLGEYEK 2 L +Y+K Sbjct: 303 KLRQYDK 309 >ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like, partial [Cucumis sativus] Length = 594 Score = 199 bits (507), Expect = 1e-49 Identities = 96/131 (73%), Positives = 114/131 (87%) Frame = -3 Query: 394 KTGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLA 215 ++G PDVVSYTSL++ +GRSQQP +ARE+FD +KRN KPNLVSYNAL+DAYGS G L Sbjct: 175 RSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLP 234 Query: 214 EAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAI 35 +AV +LREME DGI PN+V+ICTLL+AC R G++VNIDSVLSAAE RGI LNTIACNSAI Sbjct: 235 QAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAI 294 Query: 34 GSYMSLGEYEK 2 GSYM++GEYEK Sbjct: 295 GSYMNIGEYEK 305 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/123 (34%), Positives = 66/123 (53%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 RPDVV++TS+++ Y Q E + +F + KPN+VSYNALI AY S G+ EA Sbjct: 109 RPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFS 168 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V EM+ G P++V+ +L+S R + V + + N ++ N+ + +Y Sbjct: 169 VFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYG 228 Query: 22 SLG 14 S G Sbjct: 229 SNG 231 Score = 56.6 bits (135), Expect = 2e-06 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 2/124 (1%) Frame = -3 Query: 391 TGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKI--KRNSWKPNLVSYNALIDAYGSEGLL 218 T IRPD + +++ + +Q +A EIF + KR+ +P++V++ ++I Y G + Sbjct: 69 TNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQI 128 Query: 217 AEAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSA 38 + V M +GI+PNIV+ L+SA + G SV + G + ++ S Sbjct: 129 EDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 188 Query: 37 IGSY 26 I ++ Sbjct: 189 ISTF 192 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/102 (27%), Positives = 56/102 (54%) Frame = -3 Query: 364 YTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVGVLREME 185 Y+S++ AY + Q KA +F+ +K + P+LV+Y A+I+AY + + + + +EME Sbjct: 360 YSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEME 419 Query: 184 GDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLN 59 + IQ + + L+ A ++ + N+ + + +GI N Sbjct: 420 ANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFN 461 >ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41720-like [Cucumis sativus] Length = 707 Score = 199 bits (507), Expect = 1e-49 Identities = 96/131 (73%), Positives = 114/131 (87%) Frame = -3 Query: 394 KTGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLA 215 ++G PDVVSYTSL++ +GRSQQP +ARE+FD +KRN KPNLVSYNAL+DAYGS G L Sbjct: 270 RSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLP 329 Query: 214 EAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAI 35 +AV +LREME DGI PN+V+ICTLL+AC R G++VNIDSVLSAAE RGI LNTIACNSAI Sbjct: 330 QAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAI 389 Query: 34 GSYMSLGEYEK 2 GSYM++GEYEK Sbjct: 390 GSYMNIGEYEK 400 Score = 78.2 bits (191), Expect = 6e-13 Identities = 42/123 (34%), Positives = 66/123 (53%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 RPDVV++TS+++ Y Q E + +F + KPN+VSYNALI AY S G+ EA Sbjct: 204 RPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFS 263 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V EM+ G P++V+ +L+S R + V + + N ++ N+ + +Y Sbjct: 264 VFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYG 323 Query: 22 SLG 14 S G Sbjct: 324 SNG 326 Score = 60.5 bits (145), Expect = 1e-07 Identities = 38/125 (30%), Positives = 66/125 (52%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 +PDV +Y +L+NA+GR+ Q A I + + R + P+ ++N LI+A GS G EA+ Sbjct: 62 KPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALR 121 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 V ++M +G+ P++VT +LSA + S + I+ +T N I + Sbjct: 122 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLI 181 Query: 22 SLGEY 8 + +Y Sbjct: 182 KVKQY 186 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/121 (26%), Positives = 60/121 (49%) Frame = -3 Query: 364 YTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVGVLREME 185 Y ++ + R + ++AR +F ++++ KP++ +YNALI+A+G G A ++ +M Sbjct: 33 YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDML 92 Query: 184 GDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYMSLGEYE 5 I P+ T L++AC CG V G+ + + N + +Y S +Y Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152 Query: 4 K 2 K Sbjct: 153 K 153 Score = 56.6 bits (135), Expect = 2e-06 Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 2/124 (1%) Frame = -3 Query: 391 TGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKI--KRNSWKPNLVSYNALIDAYGSEGLL 218 T IRPD + +++ + +Q +A EIF + KR+ +P++V++ ++I Y G + Sbjct: 164 TNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQI 223 Query: 217 AEAVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSA 38 + V M +GI+PNIV+ L+SA + G SV + G + ++ S Sbjct: 224 EDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSL 283 Query: 37 IGSY 26 I ++ Sbjct: 284 ISTF 287 Score = 56.6 bits (135), Expect = 2e-06 Identities = 28/102 (27%), Positives = 56/102 (54%) Frame = -3 Query: 364 YTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVGVLREME 185 Y+S++ AY + Q KA +F+ +K + P+LV+Y A+I+AY + + + + +EME Sbjct: 455 YSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEME 514 Query: 184 GDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLN 59 + IQ + + L+ A ++ + N+ + + +GI N Sbjct: 515 ANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFN 556 >ref|XP_002308939.1| predicted protein [Populus trichocarpa] gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa] Length = 786 Score = 199 bits (507), Expect = 1e-49 Identities = 98/130 (75%), Positives = 115/130 (88%) Frame = -3 Query: 391 TGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAE 212 +G+RPDVVSYTSLLN+YGRSQQP+KARE+F+ +KR+ KPN+VSYNA+IDAYGS GLLAE Sbjct: 376 SGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAE 435 Query: 211 AVGVLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIG 32 AV VLREME DGI PN V+ICTLL+AC RC R+VNID VL AAE R I+LNTIA NSAIG Sbjct: 436 AVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIG 495 Query: 31 SYMSLGEYEK 2 SYM++GE+EK Sbjct: 496 SYMNVGEFEK 505 Score = 77.8 bits (190), Expect = 8e-13 Identities = 39/122 (31%), Positives = 69/122 (56%) Frame = -3 Query: 379 PDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVGV 200 PDVV++TS+++ Y + Q E R +F + KPN+VSYN L+ AY S G+ EA+ V Sbjct: 310 PDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSV 369 Query: 199 LREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYMS 20 ++ G++P++V+ +LL++ R + V + ++ N ++ N+ I +Y S Sbjct: 370 FNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGS 429 Query: 19 LG 14 G Sbjct: 430 NG 431 Score = 65.1 bits (157), Expect = 6e-09 Identities = 40/127 (31%), Positives = 66/127 (51%) Frame = -3 Query: 382 RPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLAEAVG 203 +PD + +L+NA+GRS Q A I + + + + P+ +YN LI+A GS G EA+ Sbjct: 167 KPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALK 226 Query: 202 VLREMEGDGIQPNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNSAIGSYM 23 + ++M +G+ P++VT +LSA + S + I+ +T N I Sbjct: 227 LCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLT 286 Query: 22 SLGEYEK 2 LG+YEK Sbjct: 287 KLGQYEK 293 Score = 60.8 bits (146), Expect = 1e-07 Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Frame = -3 Query: 394 KTGIRPDVVSYTSLLNAYGRSQQPEKAREIFDKIKRNSWKPNLVSYNALIDAYGSEGLLA 215 + G+ PD+V++ +L+AY Q KA F+ +K + +P+ + N +I G Sbjct: 233 ENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQYE 292 Query: 214 EAVGVLREMEGDGIQ--PNIVTICTLLSACSRCGRQVNIDSVLSAAESRGIQLNTIACNS 41 +A+G+ + M + P++VT +++ S G+ N +V S + G++ N ++ N+ Sbjct: 293 KAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNT 352 Query: 40 AIGSYMSLG 14 +G+Y S G Sbjct: 353 LMGAYASHG 361