BLASTX nr result

ID: Coptis25_contig00031942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031942
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    79   3e-13
gb|ABA94758.1| hAT family dimerisation domain containing protein...    67   2e-09
ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group] g...    67   2e-09
gb|EEE50486.1| hypothetical protein OsJ_30552 [Oryza sativa Japo...    67   2e-09
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...    67   2e-09

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/77 (48%), Positives = 55/77 (71%)
 Frame = +3

Query: 39  EQDPTILAAEFQQHLLEEDNLQNKSEVERILAETNEVGGDKFDILGWWKINASRYRILSL 218
           EQD       F +HL EE N+++KSE++  L+E+NE   D FDIL WWK+N S++++L+ 
Sbjct: 422 EQDDLNFVYTFTRHLYEEHNVESKSELDWYLSESNERVDDGFDILHWWKVNCSKFKVLAQ 481

Query: 219 VVRDVLAVLISSVASES 269
           + +DVLA+ IS+VA ES
Sbjct: 482 IAKDVLAIPISTVAFES 498


>gb|ABA94758.1| hAT family dimerisation domain containing protein [Oryza sativa
            Japonica Group]
          Length = 932

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +3

Query: 108  KSEVERILAETNEVGGDKFDILGWWKINASRYRILSLVVRDVLAVLISSVASESA 272
            KSEV++ L+E NE    KFDIL WWK N++R+ ILS + RD+LA+ I+SVASESA
Sbjct: 858  KSEVDKYLSEDNEPDTPKFDILKWWKANSTRFPILSHLARDLLAIPITSVASESA 912


>ref|NP_001042140.2| Os01g0170400 [Oryza sativa Japonica Group]
           gi|255672914|dbj|BAF04054.2| Os01g0170400 [Oryza sativa
           Japonica Group]
          Length = 664

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +3

Query: 108 KSEVERILAETNEVGGDKFDILGWWKINASRYRILSLVVRDVLAVLISSVASESA 272
           KSEV++ L+E NE    KFDIL WWK N++R+ ILS + RD+LA+ I+SVASESA
Sbjct: 470 KSEVDKYLSEDNEPDTPKFDILKWWKANSTRFPILSHLARDLLAIPITSVASESA 524


>gb|EEE50486.1| hypothetical protein OsJ_30552 [Oryza sativa Japonica Group]
          Length = 690

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/55 (60%), Positives = 43/55 (78%)
 Frame = +3

Query: 108 KSEVERILAETNEVGGDKFDILGWWKINASRYRILSLVVRDVLAVLISSVASESA 272
           KSEV++ L+E NE    KFDIL WWK N++R+ ILS + RD+LA+ I+SVASESA
Sbjct: 616 KSEVDKYLSEDNEPDTPKFDILKWWKANSTRFPILSHLARDLLAIPITSVASESA 670


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/90 (40%), Positives = 59/90 (65%)
 Frame = +3

Query: 3    SQTASRIDVDDDEQDPTILAAEFQQHLLEEDNLQNKSEVERILAETNEVGGDKFDILGWW 182
            S+ +++ DVDD          +F++ + ++ NL +++EV+  L+E  E     FDIL WW
Sbjct: 1445 SRFSNKEDVDD----------QFEKDMDQDPNL-SQTEVDIYLSEPREKKNPDFDILNWW 1493

Query: 183  KINASRYRILSLVVRDVLAVLISSVASESA 272
            K+N+++Y  L L+ RD+LA+ IS+VASESA
Sbjct: 1494 KVNSTKYPTLGLIARDILAMPISTVASESA 1523


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