BLASTX nr result

ID: Coptis25_contig00031920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031920
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...   100   2e-19
emb|CBI16521.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002304859.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chlorop...    96   3e-18
ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus ...    96   3e-18

>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 41/79 (51%), Positives = 56/79 (70%)
 Frame = +1

Query: 1   KTSQKQILLVFYCIPVSPGKSRVLFSFPRNFAVWVDQIIPRWILHIRSNXXXXXXXXXXX 180
           K  Q+++LL+F CIPVSPG SR++++FPRNF VWVD+++PRW+ H+  N           
Sbjct: 324 KEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRVVPRWMFHVGQNLILDSDLYLLH 383

Query: 181 XEERKLTEIGHSNWQKICF 237
            EERK+ +IG SNWQK CF
Sbjct: 384 VEERKIMDIGPSNWQKACF 402


>emb|CBI16521.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 41/79 (51%), Positives = 56/79 (70%)
 Frame = +1

Query: 1   KTSQKQILLVFYCIPVSPGKSRVLFSFPRNFAVWVDQIIPRWILHIRSNXXXXXXXXXXX 180
           K  Q+++LL+F CIPVSPG SR++++FPRNF VWVD+++PRW+ H+  N           
Sbjct: 193 KEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRVVPRWMFHVGQNLILDSDLYLLH 252

Query: 181 XEERKLTEIGHSNWQKICF 237
            EERK+ +IG SNWQK CF
Sbjct: 253 VEERKIMDIGPSNWQKACF 271


>ref|XP_002304859.1| predicted protein [Populus trichocarpa] gi|222842291|gb|EEE79838.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 37/76 (48%), Positives = 55/76 (72%)
 Frame = +1

Query: 10  QKQILLVFYCIPVSPGKSRVLFSFPRNFAVWVDQIIPRWILHIRSNXXXXXXXXXXXXEE 189
           Q++ LL+F+C+PV PGKSR++++FPRNF VW+D+I+PRW+ H+  N            EE
Sbjct: 21  QRRGLLLFFCVPVGPGKSRLIYTFPRNFGVWMDRIMPRWVFHLSQNRILDSDLYLLHLEE 80

Query: 190 RKLTEIGHSNWQKICF 237
           R++ E+G +NWQK CF
Sbjct: 81  RRIMEVGPTNWQKACF 96


>ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 531

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 38/78 (48%), Positives = 53/78 (67%)
 Frame = +1

Query: 4   TSQKQILLVFYCIPVSPGKSRVLFSFPRNFAVWVDQIIPRWILHIRSNXXXXXXXXXXXX 183
           ++QK+  L+F C+PVSPGKSR+++ FPRNF VW+D+I+PRWI H+  N            
Sbjct: 324 SAQKKFALIFVCVPVSPGKSRLIWCFPRNFGVWIDKIVPRWIFHVGQNRILDSDLYLLHV 383

Query: 184 EERKLTEIGHSNWQKICF 237
           EE+K+ +IG  NW K CF
Sbjct: 384 EEQKIVDIGPKNWHKACF 401


>ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus communis]
           gi|223526766|gb|EEF28992.1| pheophorbide A oxygenase,
           putative [Ricinus communis]
          Length = 552

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 40/76 (52%), Positives = 53/76 (69%)
 Frame = +1

Query: 10  QKQILLVFYCIPVSPGKSRVLFSFPRNFAVWVDQIIPRWILHIRSNXXXXXXXXXXXXEE 189
           Q++  LVF CIPVSPG SR++++FPRNF VW+D+I PRW+ H+  N            EE
Sbjct: 347 QQRAALVFICIPVSPGNSRLIWAFPRNFGVWIDKIFPRWMFHVGQNLILDSDLYLLHVEE 406

Query: 190 RKLTEIGHSNWQKICF 237
           RK+T+IG +NWQK CF
Sbjct: 407 RKITDIGVANWQKACF 422


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