BLASTX nr result

ID: Coptis25_contig00031915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031915
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26279.3| unnamed protein product [Vitis vinifera]              188   4e-46
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     188   4e-46
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        185   3e-45
ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   183   1e-44
ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073...   180   9e-44

>emb|CBI26279.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/100 (91%), Positives = 93/100 (93%)
 Frame = +1

Query: 1   VPSAFQTSITIYNVKEFLEDGVFIPTDVKVKQMKGARQDCITVQKIFSRDRVVMAYEVRD 180
           VPSAFQT ITIYNVKEFLEDGVFIPTDVK KQMKGA+ DC+TVQK FSRDRVVMAYEVRD
Sbjct: 156 VPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVMAYEVRD 215

Query: 181 KPWALKPEDWDRVVAVFVLGKEWQFKYWPFKDHVEIFNKI 300
           KP ALK EDWDRVVAVFVLGKEWQFK WPFKDHVEIFNKI
Sbjct: 216 KPSALKTEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI 255


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/100 (91%), Positives = 93/100 (93%)
 Frame = +1

Query: 1   VPSAFQTSITIYNVKEFLEDGVFIPTDVKVKQMKGARQDCITVQKIFSRDRVVMAYEVRD 180
           VPSAFQT ITIYNVKEFLEDGVFIPTDVK KQMKGA+ DC+TVQK FSRDRVVMAYEVRD
Sbjct: 257 VPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQMKGAKPDCVTVQKKFSRDRVVMAYEVRD 316

Query: 181 KPWALKPEDWDRVVAVFVLGKEWQFKYWPFKDHVEIFNKI 300
           KP ALK EDWDRVVAVFVLGKEWQFK WPFKDHVEIFNKI
Sbjct: 317 KPSALKTEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI 356


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/100 (89%), Positives = 92/100 (92%)
 Frame = +1

Query: 1   VPSAFQTSITIYNVKEFLEDGVFIPTDVKVKQMKGARQDCITVQKIFSRDRVVMAYEVRD 180
           VPSAFQT ITIYNVKEFLEDGV+IPTDVKVKQMKGAR DC+TVQK  SRDRVV AYEVRD
Sbjct: 233 VPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQMKGARPDCVTVQKKLSRDRVVTAYEVRD 292

Query: 181 KPWALKPEDWDRVVAVFVLGKEWQFKYWPFKDHVEIFNKI 300
           KP  LKP+DWDRVVAVFVLGKEWQFK WPFKDHVEIFNKI
Sbjct: 293 KPSTLKPDDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI 332


>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/102 (90%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
 Frame = +1

Query: 1   VPSAFQTSITIYNVKEFLEDGVFIPTDVKVKQMKGARQDCITVQKIFSRDR--VVMAYEV 174
           VPSAFQT ITIYNVKEFLEDGVFIPTDVKVKQMKGAR DC+TVQK FSRDR  VV AYEV
Sbjct: 249 VPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQMKGARPDCVTVQKKFSRDRDRVVTAYEV 308

Query: 175 RDKPWALKPEDWDRVVAVFVLGKEWQFKYWPFKDHVEIFNKI 300
           RDKP ALK EDWDRVVAVFVLGKEWQFK WPFKDHVEIFNKI
Sbjct: 309 RDKPSALKSEDWDRVVAVFVLGKEWQFKDWPFKDHVEIFNKI 350


>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
           unknown [Medicago truncatula]
           gi|355512117|gb|AES93740.1| Parafibromin [Medicago
           truncatula] gi|388521181|gb|AFK48652.1| unknown
           [Medicago truncatula]
          Length = 398

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/100 (85%), Positives = 91/100 (91%)
 Frame = +1

Query: 1   VPSAFQTSITIYNVKEFLEDGVFIPTDVKVKQMKGARQDCITVQKIFSRDRVVMAYEVRD 180
           VPSAFQT ITIYNVK+FLEDGV++PTDVKVK MKGA+ DC+TVQK  SRDR V AYEVRD
Sbjct: 242 VPSAFQTLITIYNVKDFLEDGVYVPTDVKVKAMKGAKPDCVTVQKKLSRDRAVTAYEVRD 301

Query: 181 KPWALKPEDWDRVVAVFVLGKEWQFKYWPFKDHVEIFNKI 300
           KP ALKPEDWDRVVAVFVLGK+WQFK WPFKDHVEIFNKI
Sbjct: 302 KPSALKPEDWDRVVAVFVLGKDWQFKDWPFKDHVEIFNKI 341


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