BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031891
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containin...   117   1e-24
ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containin...   112   3e-23
ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containin...   112   4e-23
ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002510504.1| nucleic acid binding protein, putative [Rici...   106   2e-21

>ref|XP_002277913.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Vitis
           vinifera]
          Length = 457

 Score =  117 bits (293), Expect = 1e-24
 Identities = 58/106 (54%), Positives = 78/106 (73%), Gaps = 7/106 (6%)
 Frame = +2

Query: 2   YYKSLIQQHGGEKPEAHDRTP---QFVN---HHHMGTKTEPLQSS-KLREPKTKNKKHCL 160
           YYKSLIQQHGGE+ E  D++    QF N   HH +G   E + +  K R+ K K  K C+
Sbjct: 351 YYKSLIQQHGGERQEPQDQSQSHSQFANRPNHHVLGMNPETVVTHPKPRDSKPKIMKPCI 410

Query: 161 YFNSSRGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVDRQLTG 298
           YF+SSRGC++GANC++QHD S+QQR+ S+PE Q+AKRMK+DR++TG
Sbjct: 411 YFHSSRGCRHGANCSYQHDASLQQRVSSMPEVQNAKRMKMDREITG 456


>ref|XP_004167632.1| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Cucumis sativus]
          Length = 444

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   YYKSLIQQHGGEKPEAHDRTPQFVNHHH--MGTKTEPLQSSKLREPKTKNKKHCLYFNSS 175
           YYKSLIQQHGGE+ +   R  QFVN H+  MGT  E LQ+   R+ K K  K C+YFNSS
Sbjct: 345 YYKSLIQQHGGERQDDPSRQ-QFVNRHNQPMGTNQEFLQNQPSRDAKFKIMKPCIYFNSS 403

Query: 176 RGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVDRQLT 295
           RGC++GANCA+QHD   QQR  SV E  S+KR KVDR+++
Sbjct: 404 RGCRHGANCAYQHDPMFQQRSSSVSEMPSSKRTKVDREIS 443


>ref|XP_004152656.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
           [Cucumis sativus]
          Length = 441

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   YYKSLIQQHGGEKPEAHDRTPQFVNHHH--MGTKTEPLQSSKLREPKTKNKKHCLYFNSS 175
           YYKSLIQQHGGE+ +   R  QFVN H+  MGT  E LQ+   R+ K K  K C+YFNSS
Sbjct: 342 YYKSLIQQHGGERQDDPPRQ-QFVNRHNQPMGTNQEFLQNQPSRDAKFKIMKPCIYFNSS 400

Query: 176 RGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVDRQLT 295
           RGC++GANCA+QHD   QQR  SV E  S+KR KVDR+++
Sbjct: 401 RGCRHGANCAYQHDPMFQQRSSSVSEMPSSKRTKVDREIS 440


>ref|XP_002301991.1| predicted protein [Populus trichocarpa] gi|222843717|gb|EEE81264.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/98 (54%), Positives = 70/98 (71%)
 Frame = +2

Query: 2   YYKSLIQQHGGEKPEAHDRTPQFVNHHHMGTKTEPLQSSKLREPKTKNKKHCLYFNSSRG 181
           YYK+LIQQHGG+K E   +     NH  +GT ++ L +SK RE K K  K C+YFNSSRG
Sbjct: 329 YYKNLIQQHGGDKQETPQQFGSRYNHQ-VGT-SQDLVNSKSRESKHKIMKPCIYFNSSRG 386

Query: 182 CKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVDRQLT 295
           C+NG NCA+QHD S QQ+   + E QS+KRMK+DR+++
Sbjct: 387 CRNGVNCAYQHDSSSQQKGSGITEVQSSKRMKMDREIS 424


>ref|XP_002510504.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551205|gb|EEF52691.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 461

 Score =  106 bits (265), Expect = 2e-21
 Identities = 57/100 (57%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
 Frame = +2

Query: 2   YYKSLIQQHGGEKPEAHDRTPQFVNHHHM--GTKTEPLQSSKLREPKTKNKKHCLYFNSS 175
           YYK+LIQQHGGE+ EA     Q+ N +    GT  E L + K RE K K  K C+YFNSS
Sbjct: 365 YYKNLIQQHGGERQEAPH---QYGNRYSQLAGTNQE-LVNPKSRELKPKIMKPCIYFNSS 420

Query: 176 RGCKNGANCAFQHDMSVQQRIGSVPEAQSAKRMKVDRQLT 295
           RGC++GANCA+QHD S QQR  ++ E QSAKRMKVDR+++
Sbjct: 421 RGCRHGANCAYQHDPSFQQRSSAISEVQSAKRMKVDREIS 460