BLASTX nr result

ID: Coptis25_contig00031889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031889
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546535.1| PREDICTED: uncharacterized protein LOC100779...    95   5e-18
ref|XP_002314339.1| predicted protein [Populus trichocarpa] gi|1...    95   5e-18
ref|XP_003533810.1| PREDICTED: uncharacterized protein LOC100500...    90   2e-16
ref|XP_003542398.1| PREDICTED: uncharacterized protein LOC100305...    89   3e-16
ref|XP_002270027.1| PREDICTED: uncharacterized protein LOC100254...    89   4e-16

>ref|XP_003546535.1| PREDICTED: uncharacterized protein LOC100779101 [Glycine max]
          Length = 74

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/69 (59%), Positives = 53/69 (76%)
 Frame = +1

Query: 31  MASWVRSITTPFRKARTFFNQNQTGDNKSQQEDDHDKRVIDLHGEVMACAYQDVQVMWSI 210
           MASW ++I TPF+KA TFFNQ    D+K++ + + + R++DLHGEVMAC Y+DVQVMWSI
Sbjct: 1   MASWKKTIATPFKKACTFFNQQPPRDHKNKSQTEQENRIMDLHGEVMACGYEDVQVMWSI 60

Query: 211 LDNSKPKLC 237
           LD SK   C
Sbjct: 61  LDKSKSTAC 69


>ref|XP_002314339.1| predicted protein [Populus trichocarpa] gi|118488665|gb|ABK96144.1|
           unknown [Populus trichocarpa]
           gi|222863379|gb|EEF00510.1| predicted protein [Populus
           trichocarpa]
          Length = 74

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/69 (62%), Positives = 51/69 (73%)
 Frame = +1

Query: 31  MASWVRSITTPFRKARTFFNQNQTGDNKSQQEDDHDKRVIDLHGEVMACAYQDVQVMWSI 210
           MASW ++IT+PFRKA TFFNQ Q      + +   +KRV+DLHGEVMAC Y+DVQVMWSI
Sbjct: 1   MASWKKTITSPFRKACTFFNQQQAVSRDKKSQPGEEKRVLDLHGEVMACGYEDVQVMWSI 60

Query: 211 LDNSKPKLC 237
           LD SK   C
Sbjct: 61  LDKSKSATC 69


>ref|XP_003533810.1| PREDICTED: uncharacterized protein LOC100500568 [Glycine max]
           gi|255630647|gb|ACU15683.1| unknown [Glycine max]
          Length = 75

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = +1

Query: 31  MASWVRSITTPFRKARTFFNQNQTGDNKSQ-QEDDHDKRVIDLHGEVMACAYQDVQVMWS 207
           MASW ++I TPF+KA TFFNQ    D+K++ Q  +   R++DLHGEVMAC Y+DVQVMWS
Sbjct: 1   MASWKKTIATPFKKACTFFNQQPPRDHKNKSQTAEQQNRIMDLHGEVMACGYEDVQVMWS 60

Query: 208 ILDNSKPKLC 237
           ILD SK   C
Sbjct: 61  ILDKSKSTAC 70


>ref|XP_003542398.1| PREDICTED: uncharacterized protein LOC100305862 [Glycine max]
           gi|255626813|gb|ACU13751.1| unknown [Glycine max]
          Length = 76

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/70 (58%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
 Frame = +1

Query: 31  MASWVRSITTPFRKARTFFNQNQTGD-NKSQQEDDHDKRVIDLHGEVMACAYQDVQVMWS 207
           MASW ++ITTPF+KA TFFNQ  T   ++ + + + +++V+DLHGEVMAC Y+DVQVMWS
Sbjct: 1   MASWKKTITTPFKKACTFFNQQPTSARDQKKSQTEQERQVMDLHGEVMACGYEDVQVMWS 60

Query: 208 ILDNSKPKLC 237
           ILD SK   C
Sbjct: 61  ILDKSKSTNC 70


>ref|XP_002270027.1| PREDICTED: uncharacterized protein LOC100254553 [Vitis vinifera]
           gi|297736831|emb|CBI26032.3| unnamed protein product
           [Vitis vinifera]
          Length = 70

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/69 (66%), Positives = 53/69 (76%)
 Frame = +1

Query: 31  MASWVRSITTPFRKARTFFNQNQTGDNKSQQEDDHDKRVIDLHGEVMACAYQDVQVMWSI 210
           MASWV++IT+PFRKA TFFNQ Q  D KSQ+   H+    DLH EVMACAY+DVQVMWSI
Sbjct: 1   MASWVKTITSPFRKACTFFNQ-QPRDKKSQKV--HENPGSDLHEEVMACAYEDVQVMWSI 57

Query: 211 LDNSKPKLC 237
           LD SK + C
Sbjct: 58  LDKSKTRAC 66


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