BLASTX nr result
ID: Coptis25_contig00031884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00031884 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo... 54 2e-12 emb|CBI17106.3| unnamed protein product [Vitis vinifera] 54 2e-12 ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [S... 52 2e-11 ref|XP_002298162.1| argonaute protein group [Populus trichocarpa... 49 2e-11 ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brac... 52 2e-10 >ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis vinifera] Length = 1038 Score = 53.9 bits (128), Expect(2) = 2e-12 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = -3 Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160 ACASLEEGYLPPVTFVVVQKR+HT F Sbjct: 869 ACASLEEGYLPPVTFVVVQKRHHTRF 894 Score = 42.7 bits (99), Expect(2) = 2e-12 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -1 Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102 ++ TR FP+DH +++LTDRSGNILPG Sbjct: 888 KRHHTRFFPSDHRSRDLTDRSGNILPG 914 >emb|CBI17106.3| unnamed protein product [Vitis vinifera] Length = 1032 Score = 53.9 bits (128), Expect(2) = 2e-12 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = -3 Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160 ACASLEEGYLPPVTFVVVQKR+HT F Sbjct: 863 ACASLEEGYLPPVTFVVVQKRHHTRF 888 Score = 42.7 bits (99), Expect(2) = 2e-12 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -1 Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102 ++ TR FP+DH +++LTDRSGNILPG Sbjct: 882 KRHHTRFFPSDHRSRDLTDRSGNILPG 908 >ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor] gi|241917930|gb|EER91074.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor] Length = 1087 Score = 52.0 bits (123), Expect(2) = 2e-11 Identities = 23/24 (95%), Positives = 24/24 (100%) Frame = -3 Query: 237 ACASLEEGYLPPVTFVVVQKRYHT 166 ACASLEEGYLPPVTFVVVQKR+HT Sbjct: 917 ACASLEEGYLPPVTFVVVQKRHHT 940 Score = 41.2 bits (95), Expect(2) = 2e-11 Identities = 18/27 (66%), Positives = 20/27 (74%) Frame = -1 Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102 ++ TRLFP DH Q TDRSGNILPG Sbjct: 936 KRHHTRLFPEDHRAQGQTDRSGNILPG 962 >ref|XP_002298162.1| argonaute protein group [Populus trichocarpa] gi|222845420|gb|EEE82967.1| argonaute protein group [Populus trichocarpa] Length = 904 Score = 49.3 bits (116), Expect(2) = 2e-11 Identities = 21/26 (80%), Positives = 23/26 (88%) Frame = -3 Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160 AC +LEEGY PPVTFVVVQKR+HT F Sbjct: 739 ACGTLEEGYCPPVTFVVVQKRHHTRF 764 Score = 43.9 bits (102), Expect(2) = 2e-11 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -1 Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102 ++ TR FPADH+ ++LTDRSGNILPG Sbjct: 758 KRHHTRFFPADHSKRDLTDRSGNILPG 784 >ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brachypodium distachyon] Length = 1055 Score = 52.0 bits (123), Expect(2) = 2e-10 Identities = 23/24 (95%), Positives = 24/24 (100%) Frame = -3 Query: 237 ACASLEEGYLPPVTFVVVQKRYHT 166 ACASLEEGYLPPVTFVVVQKR+HT Sbjct: 882 ACASLEEGYLPPVTFVVVQKRHHT 905 Score = 38.1 bits (87), Expect(2) = 2e-10 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Frame = -1 Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG-----MRSYPINYQVIAC 63 ++ TRLFP H + +TD+SGNILPG M +P + C Sbjct: 901 KRHHTRLFPEVHGRREMTDKSGNILPGTVVDLMICHPTEFDFYLC 945