BLASTX nr result

ID: Coptis25_contig00031884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031884
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    54   2e-12
emb|CBI17106.3| unnamed protein product [Vitis vinifera]               54   2e-12
ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [S...    52   2e-11
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...    49   2e-11
ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brac...    52   2e-10

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score = 53.9 bits (128), Expect(2) = 2e-12
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160
           ACASLEEGYLPPVTFVVVQKR+HT F
Sbjct: 869 ACASLEEGYLPPVTFVVVQKRHHTRF 894



 Score = 42.7 bits (99), Expect(2) = 2e-12
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -1

Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102
           ++  TR FP+DH +++LTDRSGNILPG
Sbjct: 888 KRHHTRFFPSDHRSRDLTDRSGNILPG 914


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 53.9 bits (128), Expect(2) = 2e-12
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -3

Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160
           ACASLEEGYLPPVTFVVVQKR+HT F
Sbjct: 863 ACASLEEGYLPPVTFVVVQKRHHTRF 888



 Score = 42.7 bits (99), Expect(2) = 2e-12
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -1

Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102
           ++  TR FP+DH +++LTDRSGNILPG
Sbjct: 882 KRHHTRFFPSDHRSRDLTDRSGNILPG 908


>ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor]
           gi|241917930|gb|EER91074.1| hypothetical protein
           SORBIDRAFT_01g011880 [Sorghum bicolor]
          Length = 1087

 Score = 52.0 bits (123), Expect(2) = 2e-11
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -3

Query: 237 ACASLEEGYLPPVTFVVVQKRYHT 166
           ACASLEEGYLPPVTFVVVQKR+HT
Sbjct: 917 ACASLEEGYLPPVTFVVVQKRHHT 940



 Score = 41.2 bits (95), Expect(2) = 2e-11
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -1

Query: 182  RKDTTRLFPADHNNQNLTDRSGNILPG 102
            ++  TRLFP DH  Q  TDRSGNILPG
Sbjct: 936  KRHHTRLFPEDHRAQGQTDRSGNILPG 962


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score = 49.3 bits (116), Expect(2) = 2e-11
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = -3

Query: 237 ACASLEEGYLPPVTFVVVQKRYHTSF 160
           AC +LEEGY PPVTFVVVQKR+HT F
Sbjct: 739 ACGTLEEGYCPPVTFVVVQKRHHTRF 764



 Score = 43.9 bits (102), Expect(2) = 2e-11
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -1

Query: 182 RKDTTRLFPADHNNQNLTDRSGNILPG 102
           ++  TR FPADH+ ++LTDRSGNILPG
Sbjct: 758 KRHHTRFFPADHSKRDLTDRSGNILPG 784


>ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brachypodium distachyon]
          Length = 1055

 Score = 52.0 bits (123), Expect(2) = 2e-10
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -3

Query: 237 ACASLEEGYLPPVTFVVVQKRYHT 166
           ACASLEEGYLPPVTFVVVQKR+HT
Sbjct: 882 ACASLEEGYLPPVTFVVVQKRHHT 905



 Score = 38.1 bits (87), Expect(2) = 2e-10
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 182  RKDTTRLFPADHNNQNLTDRSGNILPG-----MRSYPINYQVIAC 63
            ++  TRLFP  H  + +TD+SGNILPG     M  +P  +    C
Sbjct: 901  KRHHTRLFPEVHGRREMTDKSGNILPGTVVDLMICHPTEFDFYLC 945


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