BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031881
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   179   2e-43
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...   165   4e-39
ref|XP_002319656.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38

>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/130 (63%), Positives = 110/130 (84%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +ALGMV  MI+KGIDPDEITYNSLISCLCRDG++EEA+GLL DME SGF+P+VI+YN V+
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARNSV 33
           LG  KV R+ +AI +  EM+ KGC PNET+YI+LI+G+ +AGWR+EA+EL N+L +R+ +
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 564

Query: 32  SKYSLRRLDK 3
           S+ S +RL+K
Sbjct: 565 SQDSFKRLNK 574



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/117 (31%), Positives = 70/117 (59%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++ +M+ +G+ PD  TYN++I  +C++GM+E A  L+  + S G +P VI+YN ++
Sbjct: 235 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILL 294

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             F    +  E   ++ EM ++GC PN+ +Y +LI  +   G   EAI +   ++ +
Sbjct: 295 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 351



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/117 (30%), Positives = 70/117 (59%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++  MI K + PD  +Y+ LIS LC++G ++ A+G++  M S+G  P ++ YNT++
Sbjct: 340 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 399

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
               K     +A+++  ++   GC PN +SY  +I  +   G RS A+ +  A++++
Sbjct: 400 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 456



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/110 (31%), Positives = 66/110 (60%)
 Frame = -3

Query: 380 MVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFS 201
           +V++M ++G +P+++TY+ LIS LCR G ++EA+ +L+ M      P   +Y+ +I    
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368

Query: 200 KVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
           K  RL  AI ++  M++ GC P+  +Y  ++  +   G  ++A+E+ N L
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/112 (30%), Positives = 61/112 (54%)
 Frame = -3

Query: 377 VSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSK 198
           V +++    +PD   YN++IS  C+   +E A  +L  M++ GF P ++TYN +I     
Sbjct: 135 VMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 194

Query: 197 VHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             +L  A+ VL +++   C P   +Y +LI+     G  +EA++L   ++AR
Sbjct: 195 RRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 246



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/109 (31%), Positives = 60/109 (55%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A+G++  MI+ G  PD + YN++++ LC++G   +A+ +   +   G  P+V +YNT+I 
Sbjct: 376 AIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS 435

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIEL 63
                     A+ ++  M++KG  P+E +Y  LI  +   G   EAI L
Sbjct: 436 ALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGL 484



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/116 (30%), Positives = 62/116 (53%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A  +++ + +KG +PD I+YN L+      G  +E   L+ +M S G +P+ +TY+ +I
Sbjct: 270 RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVA 45
               +  R+ EAI VL  M+ K   P+  SY  LI  +   G    AI + + +++
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 385



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/116 (30%), Positives = 59/116 (50%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           AL ++ +++     P  ITY  LI     +G + EAM LL +M + G  P + TYN +I 
Sbjct: 201 ALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 260

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
           G  K   +  A +++  + +KGC P+  SY +L++     G   E  +L   + +R
Sbjct: 261 GMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/116 (30%), Positives = 61/116 (52%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A  ++++M  +G  PD +TYN +I  LC    +  A+ +L  +      P+VITY  +I 
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIE 225

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
                  + EA+ +L EM+A+G  P+  +Y  +I+G+   G    A EL  +L ++
Sbjct: 226 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 281


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/130 (63%), Positives = 110/130 (84%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +ALGMV  MI+KG+DPDEITYNSLISCLCRDG++EEA+GLL DME SGF+P+VI+YN V+
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARNSV 33
           LG  KV R+ +AI +  EM+ KGC PNET+YI+LI+G+ +AGWR+EA+EL N+L +R+ +
Sbjct: 495 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVI 554

Query: 32  SKYSLRRLDK 3
           S+ S +RL+K
Sbjct: 555 SQDSFKRLNK 564



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/117 (32%), Positives = 70/117 (59%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++ +M+ +G+ PD  TYN++I  +C++GM+E A  L+  + S G KP VI+YN ++
Sbjct: 225 EAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILL 284

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             F    +  E   ++ EM ++GC PN+ +Y +LI  +   G   EAI +   ++ +
Sbjct: 285 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/117 (30%), Positives = 70/117 (59%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++  MI K + PD  +Y+ LIS LC++G ++ A+G++  M S+G  P ++ YNT++
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 389

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
               K     +A+++  ++   GC PN +SY  +I  +   G RS A+ +  A++++
Sbjct: 390 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISK 446



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/110 (31%), Positives = 66/110 (60%)
 Frame = -3

Query: 380 MVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFS 201
           +V++M ++G +P+++TY+ LIS LCR G ++EA+ +L+ M      P   +Y+ +I    
Sbjct: 299 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 358

Query: 200 KVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
           K  RL  AI ++  M++ GC P+  +Y  ++  +   G  ++A+E+ N L
Sbjct: 359 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/112 (30%), Positives = 61/112 (54%)
 Frame = -3

Query: 377 VSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSK 198
           V +++    +PD   YN++IS  C+   +E A  +L  M++ GF P ++TYN +I     
Sbjct: 125 VMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 184

Query: 197 VHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             +L  A+ VL +++   C P   +Y +LI+     G  +EA++L   ++AR
Sbjct: 185 RRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/109 (31%), Positives = 60/109 (55%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A+G++  MI+ G  PD + YN++++ LC++G   +A+ +   +   G  P+V +YNT+I 
Sbjct: 366 AIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS 425

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIEL 63
                     A+ ++  M++KG  P+E +Y  LI  +   G   EAI L
Sbjct: 426 ALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGL 474



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/116 (30%), Positives = 61/116 (52%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A  +++ + +KG  PD I+YN L+      G  +E   L+ +M S G +P+ +TY+ +I
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVA 45
               +  R+ EAI VL  M+ K   P+  SY  LI  +   G    AI + + +++
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/116 (30%), Positives = 59/116 (50%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           AL ++ +++     P  ITY  LI     +G + EAM LL +M + G  P + TYN +I 
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
           G  K   +  A +++  + +KGC P+  SY +L++     G   E  +L   + +R
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/116 (30%), Positives = 61/116 (52%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A  ++++M  +G  PD +TYN +I  LC    +  A+ +L  +      P+VITY  +I 
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIE 215

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
                  + EA+ +L EM+A+G  P+  +Y  +I+G+   G    A EL  +L ++
Sbjct: 216 ATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSK 271



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 36/118 (30%), Positives = 60/118 (50%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           ++L  +  ++NKG  PD I    LI        +E+A  ++  +ES   +P V  YN VI
Sbjct: 86  ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVI 144

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARN 39
            GF KV+R+  A  VL  M A+G  P+  +Y ++I  +        A+++ + L+  N
Sbjct: 145 SGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN 202


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/130 (62%), Positives = 109/130 (83%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           KAL M+S+MI KGIDPDEITYNSLISCLCRDG+++EA+GLL DME++ F+P+VI++N V+
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARNSV 33
           LG  K HR++E I++L+ MV KGC PNETSY++LI+G+AYAGWR+EA+EL N+L     +
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548

Query: 32  SKYSLRRLDK 3
           S  S +RL+K
Sbjct: 549 SGDSSKRLNK 558



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/110 (33%), Positives = 62/110 (56%)
 Frame = -3

Query: 371 KMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSKVH 192
           +M ++G  PD +TYN +I  LC  G +E A  ++ ++   G KPSVITY  +I       
Sbjct: 156 RMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEG 215

Query: 191 RLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
           R+ EA+++  E+V++G  P+  +Y  +I+G+   G    A++    L AR
Sbjct: 216 RINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSAR 265



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/114 (28%), Positives = 64/114 (56%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +AL +  +++++G+ PD  TYN++I  +C++GM + A+  +R + + G  P V++YN ++
Sbjct: 219 EALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILL 278

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
             F    R  +   ++ +MV  GC PN  ++ +LI      G   EA+ +   +
Sbjct: 279 RSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/103 (34%), Positives = 58/103 (56%)
 Frame = -3

Query: 350 DPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSKVHRLYEAID 171
           DPD  +YN++IS   +   ++ A  +   M S GF P V+TYN +I       +L  A +
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187

Query: 170 VLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
           V+ E++  GC P+  +Y +LI+     G  +EA+EL + LV+R
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSR 230



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 61/110 (55%)
 Frame = -3

Query: 380 MVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFS 201
           ++  M+  G +P+ +T++ LIS  CR+G + EA+ +L  M+  G  P   +Y+ +I  F 
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352

Query: 200 KVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
           K  RL  AI+ L +MV+ GC P+  +Y  ++  +   G    A+++   L
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL 402



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/116 (32%), Positives = 61/116 (52%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +AL  V  +  +G +PD ++YN L+         E+   L++DM  SG +P+V+T++ +I
Sbjct: 254 RALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVA 45
             F +  R+ EA++VL  M  KG  P+  SY  LI      G    AIE    +V+
Sbjct: 314 SSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/117 (27%), Positives = 62/117 (52%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++  M  KG+ PD  +Y+ LIS  C++G ++ A+  L  M S G  P ++ YNT++
Sbjct: 324 EAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTIL 383

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
               K      A+DV  ++   GC P   +Y  +   +   G + +A+E+ + ++ +
Sbjct: 384 ATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRK 440



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/109 (30%), Positives = 59/109 (54%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A+  + KM++ G  PD + YN++++ LC+ G  + A+ +   ++  G  P+V  YNT+  
Sbjct: 360 AIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFS 419

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIEL 63
                    +A++++ EM+ KG  P+E +Y  LI  +   G   EAI L
Sbjct: 420 ALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/95 (31%), Positives = 51/95 (53%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A  ++ +++  G  P  ITY  LI     +G + EA+ L  ++ S G +P + TYN +I 
Sbjct: 185 AFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQ 105
           G  K      A+D +  + A+GC P+  SY +L++
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLR 279


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330308|gb|EFH60727.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/130 (59%), Positives = 103/130 (79%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +AL M+ +M++ GIDPDEITYNS+ISCLCR+GM+++A  LL DM S  F PSV+TYN V+
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARNSV 33
           LGF K HR+ +AIDVL  MV  GC PNET+Y VLI+G+ +AG+R+EA+EL N LV  N++
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571

Query: 32  SKYSLRRLDK 3
           S+YS +RL +
Sbjct: 572 SEYSFKRLHR 581



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/110 (35%), Positives = 66/110 (60%)
 Frame = -3

Query: 380 MVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFS 201
           +++KM ++  DP+ +TY+ LI+ LCRDG +EEAM LL+ M+  G  P   +Y+ +I  F 
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 375

Query: 200 KVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
           +  RL  AI+ L  M++ GC P+  +Y  ++  +   G   +A+E+   L
Sbjct: 376 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 425



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/110 (30%), Positives = 67/110 (60%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +AL ++ +M+++G+ PD  TYN++I  +C++GM++ A  ++R++E  G +P VI+YN ++
Sbjct: 242 EALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIEL 63
                  +  E   ++ +M ++ C PN  +Y +LI  +   G   EA+ L
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 351



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/116 (28%), Positives = 64/116 (55%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A+ ++  M  KG+ PD  +Y+ LI+  CR+G ++ A+  L  M S G  P ++ YNTV+
Sbjct: 347 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 406

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVA 45
               K  +  +A+++  ++   GC PN +SY  +   +  +G +  A+ +   +V+
Sbjct: 407 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVS 462



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           AL ++ ++++    P  ITY  LI     +G ++EA+ LL +M S G KP + TYNT+I 
Sbjct: 208 ALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIR 267

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARN--- 39
           G  K   +  A +++  +  KGC P+  SY +L++ +   G   E  +L   + +     
Sbjct: 268 GMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 327

Query: 38  SVSKYSL 18
           +V  YS+
Sbjct: 328 NVVTYSI 334



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/112 (29%), Positives = 60/112 (53%)
 Frame = -3

Query: 377 VSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSK 198
           V +++ K   PD   YN+LI+  C+   +++A  +L  M S  F P  +TYN +I     
Sbjct: 142 VMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 201

Query: 197 VHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             +L  A+ VL ++++  C P   +Y +LI+     G   EA++L + +++R
Sbjct: 202 RGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR 253



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/113 (30%), Positives = 61/113 (53%)
 Frame = -3

Query: 389 ALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVIL 210
           A  ++ +M +K   PD +TYN +I  LC  G ++ A+ +L  + S   +P+VITY  +I 
Sbjct: 173 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIE 232

Query: 209 GFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
                  + EA+ +L EM+++G  P+  +Y  +I+G+   G    A E+   L
Sbjct: 233 ATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL 285


>ref|XP_002319656.1| predicted protein [Populus trichocarpa] gi|222858032|gb|EEE95579.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/130 (56%), Positives = 106/130 (81%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +ALGM+S+M++KGIDPD ITYNSLISCLCRDGM++EA+GLL DM S  F+P++++Y TV+
Sbjct: 343 RALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVL 402

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARNSV 33
           LG  K HR+ +AI+VL  M+  GC PNET+Y +LI+G+ ++G R++A+EL N+L   N++
Sbjct: 403 LGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAI 462

Query: 32  SKYSLRRLDK 3
           S+ S +RL+K
Sbjct: 463 SEDSFKRLNK 472



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/114 (30%), Positives = 64/114 (56%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +AL ++ +M+++G++PD  TYN +   LC++G ++ A   +R + S G KP VITYN ++
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL 192

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
                  +  E    + E+ ++GC PN  +Y +LI  +   G   E++ L   +
Sbjct: 193 RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/109 (31%), Positives = 62/109 (56%)
 Frame = -3

Query: 377 VSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSK 198
           +S++ ++G +P+ +TY+ LIS LCRDG +EE++ L++ M+  G  P    Y+ +I  F +
Sbjct: 208 MSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCR 267

Query: 197 VHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNAL 51
             +L  AI+ L  M+  G  P+  +Y  ++  +   G    A+E+   L
Sbjct: 268 EGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKL 316



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/117 (27%), Positives = 64/117 (54%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +++ +V  M  KG+ PD   Y+ LI+  CR+G ++ A+  L  M   GF P ++ YNT++
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
               K      A+++  ++   GC PN +SY  ++  +  +G R  A+ + + ++++
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSK 354



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = -3

Query: 380 MVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDM-ESSGFKPSVITYNTVILGF 204
           ++ +M  KG  PD +T+N +I   C  G ++ A+ +  ++ + +  KP++ITY  +I  +
Sbjct: 66  VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 203 SKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
                + EA+ +L EM+++G  P+  +Y V+ +G+   G    A E    L +R
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = -3

Query: 377 VSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSK 198
           V  ++ K   PD   YN++IS  C+   +E A  +L  M+  GF P V+T+N +I  F  
Sbjct: 32  VMGILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCG 91

Query: 197 VHRLYEAIDVLVEMVA-KGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVAR 42
             ++  A+ V  E++    C P   +Y +LI+     G   EA++L + +++R
Sbjct: 92  KGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR 144



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/115 (27%), Positives = 58/115 (50%)
 Frame = -3

Query: 392 KALGMVSKMINKGIDPDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVI 213
           +A   V  + ++G  PD ITYN L+  L   G  +E    + ++ S G +P+V+TY+ +I
Sbjct: 168 RAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILI 227

Query: 212 LGFSKVHRLYEAIDVLVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALV 48
               +  ++ E+++++  M  KG  P+   Y  LI      G    AIE  + ++
Sbjct: 228 SSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMI 282



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = -3

Query: 347 PDEITYNSLISCLCRDGMMEEAMGLLRDMESSGFKPSVITYNTVILGFSKVHRLYEAIDV 168
           P  ITY  LI     +G ++EA+ LL +M S G +P   TYN +  G  K  ++  A + 
Sbjct: 113 PTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEF 172

Query: 167 LVEMVAKGCCPNETSYIVLIQGVAYAGWRSEAIELTNALVARN---SVSKYSL 18
           +  + ++GC P+  +Y +L++ +   G   E  +  + + +R    +V  YS+
Sbjct: 173 VRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225