BLASTX nr result

ID: Coptis25_contig00031880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031880
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion chann...   367   e-100
ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion chann...   367   e-100
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   367   1e-99
ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2...   366   2e-99
dbj|BAJ33894.1| unnamed protein product [Thellungiella halophila]     360   9e-98

>ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 663

 Score =  367 bits (943), Expect = e-100
 Identities = 175/209 (83%), Positives = 188/209 (89%)
 Frame = -2

Query: 629  MEWWMRRRHLPPIFRQRVRLYERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQ 450
            +EWWMR+R LP  FRQRVR YERQ+WAAMRGVDECE+IKNLPEGLRR+IKYHLCLDLV+Q
Sbjct: 404  LEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQ 463

Query: 449  VPLFQHMDELVLENICDRVKSLIFPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTS 270
            VPLFQHMD+LVLENICDRVKSLIF KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ S
Sbjct: 464  VPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKS 523

Query: 269  CCMLGPGNFSGDELLSWCLRRPFVERXXXXXXXXXXXXXXEAFELDAQDVKYVTQNFRYT 90
            CCMLGPGNFSGDELLSWCLRRPF+ER              EAF L+A+DVKYVTQ+FRYT
Sbjct: 524  CCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLVTLETTEAFSLEAEDVKYVTQHFRYT 583

Query: 89   FVNEKVKRSARYYSPGWRTWAAVAIQLAW 3
            FVN+KVKRSARYYSPGWRTWAAVAIQLAW
Sbjct: 584  FVNDKVKRSARYYSPGWRTWAAVAIQLAW 612


>ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
            sativus]
          Length = 659

 Score =  367 bits (943), Expect = e-100
 Identities = 175/209 (83%), Positives = 188/209 (89%)
 Frame = -2

Query: 629  MEWWMRRRHLPPIFRQRVRLYERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQ 450
            +EWWMR+R LP  FRQRVR YERQ+WAAMRGVDECE+IKNLPEGLRR+IKYHLCLDLV+Q
Sbjct: 400  LEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQ 459

Query: 449  VPLFQHMDELVLENICDRVKSLIFPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTS 270
            VPLFQHMD+LVLENICDRVKSLIF KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ S
Sbjct: 460  VPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKS 519

Query: 269  CCMLGPGNFSGDELLSWCLRRPFVERXXXXXXXXXXXXXXEAFELDAQDVKYVTQNFRYT 90
            CCMLGPGNFSGDELLSWCLRRPF+ER              EAF L+A+DVKYVTQ+FRYT
Sbjct: 520  CCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLVTLETTEAFSLEAEDVKYVTQHFRYT 579

Query: 89   FVNEKVKRSARYYSPGWRTWAAVAIQLAW 3
            FVN+KVKRSARYYSPGWRTWAAVAIQLAW
Sbjct: 580  FVNDKVKRSARYYSPGWRTWAAVAIQLAW 608


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 687

 Score =  367 bits (941), Expect = 1e-99
 Identities = 174/209 (83%), Positives = 188/209 (89%)
 Frame = -2

Query: 629  MEWWMRRRHLPPIFRQRVRLYERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQ 450
            +EWWMR+R LPP FR RVR YERQ+WAAMRGVDECE+I+NLPEGLRR+IKYHLCLDLV+Q
Sbjct: 428  IEWWMRKRRLPPEFRHRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQ 487

Query: 449  VPLFQHMDELVLENICDRVKSLIFPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTS 270
            VPLFQHMD+LVLENICDRVKSLIF KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ S
Sbjct: 488  VPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKS 547

Query: 269  CCMLGPGNFSGDELLSWCLRRPFVERXXXXXXXXXXXXXXEAFELDAQDVKYVTQNFRYT 90
            CCMLGPGNFSGDELLSWCLRRPF+ER              EAF L+A+DVKYVTQ+FRYT
Sbjct: 548  CCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYT 607

Query: 89   FVNEKVKRSARYYSPGWRTWAAVAIQLAW 3
            FVNE+VKRSARYYSPGWRTWAAVAIQLAW
Sbjct: 608  FVNERVKRSARYYSPGWRTWAAVAIQLAW 636


>ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  366 bits (939), Expect = 2e-99
 Identities = 174/209 (83%), Positives = 188/209 (89%)
 Frame = -2

Query: 629  MEWWMRRRHLPPIFRQRVRLYERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQ 450
            +EWWMR+RHLP  FRQRVR YERQ+WAAMRGVDECE+I+NLPEGLRR+IKYHLCLDLV+Q
Sbjct: 376  IEWWMRKRHLPTGFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQ 435

Query: 449  VPLFQHMDELVLENICDRVKSLIFPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTS 270
            VPLFQHMD+LVLENICDRVKSLIF KGETITREGDPVQRMLFVVRGHLQSSQVLRDG+ S
Sbjct: 436  VPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKS 495

Query: 269  CCMLGPGNFSGDELLSWCLRRPFVERXXXXXXXXXXXXXXEAFELDAQDVKYVTQNFRYT 90
            CCMLGPGNFSGDELLSWCLRRPF+ER              EAF L+A+DVKYVTQ+FRYT
Sbjct: 496  CCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYT 555

Query: 89   FVNEKVKRSARYYSPGWRTWAAVAIQLAW 3
            FV E+VKRSARYYSPGWRTWAAVAIQLAW
Sbjct: 556  FVKERVKRSARYYSPGWRTWAAVAIQLAW 584


>dbj|BAJ33894.1| unnamed protein product [Thellungiella halophila]
          Length = 626

 Score =  360 bits (925), Expect = 9e-98
 Identities = 171/209 (81%), Positives = 187/209 (89%)
 Frame = -2

Query: 629 MEWWMRRRHLPPIFRQRVRLYERQKWAAMRGVDECEIIKNLPEGLRRNIKYHLCLDLVKQ 450
           +EWWM++RHLP  FRQRVR YERQ+WAAMRGVDECE+++NLPEGLRR+IKYHLCLDLV+Q
Sbjct: 367 IEWWMKKRHLPLGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDLVRQ 426

Query: 449 VPLFQHMDELVLENICDRVKSLIFPKGETITREGDPVQRMLFVVRGHLQSSQVLRDGLTS 270
           VPLFQHMD+LVLENICDRVKSLIF KGETI +EGD VQRMLFVVRGHLQSSQ+LRDG+ S
Sbjct: 427 VPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKS 486

Query: 269 CCMLGPGNFSGDELLSWCLRRPFVERXXXXXXXXXXXXXXEAFELDAQDVKYVTQNFRYT 90
           CCMLGPGNFSGDELLSWCLRRPFVER              EAF LDA+DVKYVTQ+FRYT
Sbjct: 487 CCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYT 546

Query: 89  FVNEKVKRSARYYSPGWRTWAAVAIQLAW 3
           FVNEKVKRSARYYSPGWRTWAAVA+QLAW
Sbjct: 547 FVNEKVKRSARYYSPGWRTWAAVAVQLAW 575


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