BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031876
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   102   3e-20
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   101   6e-20
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    93   2e-17
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    89   4e-16

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  102 bits (254), Expect = 3e-20
 Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
 Frame = -3

Query: 487 LIKRVRDFVSVVESDYD---YLTHRFLVFKLDQLEVKWIEVKSLGGRSVFLGVNSPLSLP 317
           L+ R  D    VE D     Y T RF V +LD    +W  V SLG R++FLG N  LSL 
Sbjct: 265 LVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 316 ASEFPGCKPDCIYFTDDYTEVYMNDLPHGV-GPHDLGVFSLEDGTLEPHYQMDGDMIFPP 140
           + +FPGCK +CIY+TDDY+E    D   G+ G  DLG+F+LEDG++EP       + +PP
Sbjct: 325 SVDFPGCKGNCIYYTDDYSE----DNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPP 380

Query: 139 PIWVEP 122
           P+WV P
Sbjct: 381 PLWVTP 386


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
 Frame = -3

Query: 487 LIKRVRDFVSVVESDYD---YLTHRFLVFKLDQLEVKWIEVKSLGGRSVFLGVNSPLSLP 317
           L+ R  D    VE D     Y T RF V +LD    +W  V SLG R++FLG N  LSL 
Sbjct: 265 LVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 316 ASEFPGCKPDCIYFTDDYTEVYMNDLPHGV-GPHDLGVFSLEDGTLEPHYQMDGDMIFPP 140
           + +FPGCK +CIY+TDDY+E    D   G+ G  DLG+F+LEDG++EP       + +PP
Sbjct: 325 SVDFPGCKGNCIYYTDDYSE----DNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPP 380

Query: 139 PIWVEP 122
           P+WV P
Sbjct: 381 PLWVTP 386


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
 Frame = -3

Query: 454 VESD-YDYLTHRFLVFKLDQLEVKWIEVKSLGGRSVFLGVNSPLSLPASEFPGCKPDCIY 278
           VE D + Y T RF VFKLD    +W  V SLG   +F+G NS L+L AS   GC  DCIY
Sbjct: 278 VEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIY 337

Query: 277 FTDDYTEVYMNDLPHGVGPHDLGVFSLEDGTLEP----HYQMDGDMIFPPPIWVEP 122
           +TDDY+    N+    +G HDLG+F L DG++EP           + +PPP+W+ P
Sbjct: 338 YTDDYS---ANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISP 390


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
 Frame = -3

Query: 451 ESDYDYLTHRFLVFKLDQLEVKWIEVKSLGGRSVFLGVNSPLSLPASEFPGCKPDCIYFT 272
           ESD  Y T  F VFK++   + W  V++LG R +F+G NS LS  AS+F GC  DCIYFT
Sbjct: 280 ESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFT 339

Query: 271 DDYTEVYMNDLPHGVGPHDLGVFSLEDGTLEP----HYQMDGDMIFPPPIWVEP 122
           DDY+E   +D     G HDLGVF L D ++EP    +      + +P PIWV P
Sbjct: 340 DDYSESNDDD---ACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSP 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/109 (41%), Positives = 65/109 (59%), Gaps = 4/109 (3%)
 Frame = -3

Query: 436 YLTHRFLVFKLDQLEVKWIEVKSLGGRSVFLGVNSPLSLPASEFPGCKPDCIYFTDDYTE 257
           Y T RF VF+LD    +W+ + +LG +++F+G NS LSL A++F GC  +CIY+TDDY +
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLD 349

Query: 256 VYMNDLPHGVGPHDLGVFSLEDGTLEP----HYQMDGDMIFPPPIWVEP 122
               +     G HDLG+F L D T+EP           + + PP+WV P
Sbjct: 350 A---NYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSP 395