BLASTX nr result

ID: Coptis25_contig00031862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031862
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250...    60   1e-07
emb|CBI31881.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CBI31882.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002303521.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis
           vinifera]
          Length = 596

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 42/103 (40%), Positives = 60/103 (58%)
 Frame = +3

Query: 45  VKMALTSSFTPLFIKTSTPLNLHCFCSSSTSRNHVQLSPSRPFLILCNSNNNFQENSISR 224
           + + LT   T + + + +PL +      S S NH+Q SPS+PF ++C      Q  +  R
Sbjct: 325 LNLYLTLFGTAMALSSVSPLYI------SKSPNHLQ-SPSKPFTVVCRIE--LQRGNYCR 375

Query: 225 KTVENVEFKQWGRLVSSALAVSVFCFSSVGMPALADLNKFEAD 353
               N E K+W RLVS+ALA +V   S V MPA+ADLNK+EA+
Sbjct: 376 A---NAESKKWQRLVSTALAAAVVTLSPV-MPAVADLNKYEAE 414



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/101 (40%), Positives = 56/101 (55%)
 Frame = +3

Query: 51  MALTSSFTPLFIKTSTPLNLHCFCSSSTSRNHVQLSPSRPFLILCNSNNNFQENSISRKT 230
           MAL SS +PL+I              S S NH++ S S+PF ++C      + N    + 
Sbjct: 1   MAL-SSVSPLYI--------------SKSPNHLR-SLSKPFTVVCRIERQRENNW---RG 41

Query: 231 VENVEFKQWGRLVSSALAVSVFCFSSVGMPALADLNKFEAD 353
             N E K+W RLVS+ALA +V   S V MPA+ADLNK+E +
Sbjct: 42  EANAESKKWQRLVSTALAAAVVTLSPV-MPAVADLNKYEVE 81


>emb|CBI31881.3| unnamed protein product [Vitis vinifera]
          Length = 261

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 45/101 (44%), Positives = 58/101 (57%)
 Frame = +3

Query: 51  MALTSSFTPLFIKTSTPLNLHCFCSSSTSRNHVQLSPSRPFLILCNSNNNFQENSISRKT 230
           MAL SS +PL+I              S S NH+Q SPS+PF ++C      Q  +  R  
Sbjct: 1   MAL-SSVSPLYI--------------SKSPNHLQ-SPSKPFTVVCRIE--LQRGNYCRA- 41

Query: 231 VENVEFKQWGRLVSSALAVSVFCFSSVGMPALADLNKFEAD 353
             N E K+W RLVS+ALA +V   S V MPA+ADLNK+EA+
Sbjct: 42  --NAESKKWQRLVSTALAAAVVTLSPV-MPAVADLNKYEAE 79


>emb|CBI31882.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/101 (40%), Positives = 56/101 (55%)
 Frame = +3

Query: 51  MALTSSFTPLFIKTSTPLNLHCFCSSSTSRNHVQLSPSRPFLILCNSNNNFQENSISRKT 230
           MAL SS +PL+I              S S NH++ S S+PF ++C      + N    + 
Sbjct: 1   MAL-SSVSPLYI--------------SKSPNHLR-SLSKPFTVVCRIERQRENNW---RG 41

Query: 231 VENVEFKQWGRLVSSALAVSVFCFSSVGMPALADLNKFEAD 353
             N E K+W RLVS+ALA +V   S V MPA+ADLNK+E +
Sbjct: 42  EANAESKKWQRLVSTALAAAVVTLSPV-MPAVADLNKYEVE 81


>ref|XP_002303521.1| predicted protein [Populus trichocarpa] gi|222840953|gb|EEE78500.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
 Frame = +3

Query: 123 SSSTSRNHVQLSPSRPFLIL----CNSNNNFQENSISRKTVENVEFKQWGRLVSSALAVS 290
           S + S  H  LS S+PF I         N F + S +   VE  + K W R+VS+ L  +
Sbjct: 13  SPNISTPHRILSLSKPFRIAYQLDTERGNQFADCSKNGYEVETAKAKNWARVVSTTLVAA 72

Query: 291 VFCFSSVGMPALADLNKFEAD 353
              FSS  +PA+ADLN+FEA+
Sbjct: 73  AISFSSCNLPAVADLNRFEAE 93


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