BLASTX nr result

ID: Coptis25_contig00031861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031861
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD25621.1|AC005287_23 Hypothetical protein [Arabidopsis thal...   127   9e-28
dbj|BAB02227.1| unnamed protein product [Arabidopsis thaliana]        120   9e-26
ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group] g...   120   1e-25
dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group]   120   1e-25
ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group] g...   120   2e-25

>gb|AAD25621.1|AC005287_23 Hypothetical protein [Arabidopsis thaliana]
          Length = 1250

 Score =  127 bits (319), Expect = 9e-28
 Identities = 64/102 (62%), Positives = 78/102 (76%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292  IASSWIASLLLPGGRTAHSRFKIVIPTDENTNCDISQGTLLHNLIRRADLIVWDEAPMTH 113
            +ASS IA+LLLPGGRTAHSRFKI I   E++ CDI  G++L N++ + DLI+WDEAPM H
Sbjct: 816  VASSAIAALLLPGGRTAHSRFKIPINVHEDSICDIKIGSMLANVLSKVDLIIWDEAPMAH 875

Query: 112  RHGFEAVNRTLEDLF-----KSQGKEFGGKTFLMGGDFRQIL 2
            RH FEAV+RTL D+      K+  K FGGKT L+GGDFRQIL
Sbjct: 876  RHTFEAVDRTLRDILSVGDEKALTKTFGGKTVLLGGDFRQIL 917


>dbj|BAB02227.1| unnamed protein product [Arabidopsis thaliana]
          Length = 619

 Score =  120 bits (302), Expect = 9e-26
 Identities = 62/102 (60%), Positives = 75/102 (73%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292 IASSWIASLLLPGGRTAHSRFKIVIPTDENTNCDISQGTLLHNLIRRADLIVWDEAPMTH 113
           +ASS IA+LLLPGGRTAHS FKI I   E+  CDI  G++L N++ + DLI+WDEAPM H
Sbjct: 185 VASSAIAALLLPGGRTAHSWFKIPINVHEDFICDIKIGSMLANVLSKVDLIIWDEAPMAH 244

Query: 112 RHGFEAVNRTLEDLF-----KSQGKEFGGKTFLMGGDFRQIL 2
           RH FEAV+RTL D+      K+  K  GGKT L+GGDFRQIL
Sbjct: 245 RHTFEAVDRTLRDILSVGDEKALTKTLGGKTVLLGGDFRQIL 286


>ref|NP_001042570.1| Os01g0244200 [Oryza sativa Japonica Group]
            gi|113532101|dbj|BAF04484.1| Os01g0244200 [Oryza sativa
            Japonica Group]
          Length = 2498

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292  IASSWIASLLLPGGRTAHSRFKIVIPTDENTNCDISQGTLLHNLIRRADLIVWDEAPMTH 113
            +ASS +ASLLLP GRTAHSRFKI I  DEN+ C I +GT+L  LI++  LI+WDEAPMTH
Sbjct: 1208 VASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTH 1267

Query: 112  RHGFEAVNRTLEDLFKSQGKE-----FGGKTFLMGGDFRQIL 2
            R  FEA++RTL DL            FGGK  ++GGDFRQIL
Sbjct: 1268 RRCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQIL 1309


>dbj|BAD81603.1| helicase-like protein [Oryza sativa Japonica Group]
          Length = 1652

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292  IASSWIASLLLPGGRTAHSRFKIVIPTDENTNCDISQGTLLHNLIRRADLIVWDEAPMTH 113
            +ASS +ASLLLP GRTAHSRFKI I  DEN+ C I +GT+L  LI++  LI+WDEAPMTH
Sbjct: 1208 VASSGVASLLLPRGRTAHSRFKIPIDIDENSICSIKRGTMLAELIQKTSLIIWDEAPMTH 1267

Query: 112  RHGFEAVNRTLEDLFKSQGKE-----FGGKTFLMGGDFRQIL 2
            R  FEA++RTL DL            FGGK  ++GGDFRQIL
Sbjct: 1268 RRCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQIL 1309


>ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
            gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa
            Japonica Group]
          Length = 1932

 Score =  120 bits (300), Expect = 2e-25
 Identities = 61/102 (59%), Positives = 73/102 (71%), Gaps = 5/102 (4%)
 Frame = -2

Query: 292  IASSWIASLLLPGGRTAHSRFKIVIPTDENTNCDISQGTLLHNLIRRADLIVWDEAPMTH 113
            +ASS +ASLLLP GRTAHSRFKI I  DEN  C I +GT+L +LI++  LI+WDEAPMTH
Sbjct: 986  VASSGVASLLLPRGRTAHSRFKIPIDIDENNICTIKRGTMLADLIQKTSLIIWDEAPMTH 1045

Query: 112  RHGFEAVNRTLEDLFKSQGKE-----FGGKTFLMGGDFRQIL 2
            R  FEA++RTL DL            FGGK  ++GGDFRQIL
Sbjct: 1046 RRCFEALDRTLRDLLSEHTPSNSIVPFGGKVVVLGGDFRQIL 1087


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