BLASTX nr result

ID: Coptis25_contig00031824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031824
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   129   1e-27
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   126   5e-27
ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like...   115   9e-24
ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Viti...   114   3e-23
ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like...   112   1e-22

>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  129 bits (323), Expect = 1e-27
 Identities = 90/221 (40%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
 Frame = -3

Query: 698 MESQNLYYNTQTTQFTPEKQKP-------------NENFVIEDLLNFSNEEEMI----GG 570
           ME+   Y  T   QFTPEK+                ++F++EDLL+FSNE++ +    G 
Sbjct: 1   MEAPEYYKKTFCPQFTPEKRHSFDSSNNKTAIGGGGDHFMVEDLLDFSNEDDAVITDGGC 60

Query: 569 GDTFDSYSIXXXXXXXXNXXXXXXXXXXXXXCCNXXXXXXXXXXXXXXXXXXXXXXQLSD 390
              FD+                          CN                        S 
Sbjct: 61  PAAFDNV----------IGNSTDSSPLNVIDSCNSSSFSGSEPNFGSRNLADGP---FSS 107

Query: 389 ELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPE----ISETHESQP------- 243
           +LCVP DD+AELEWLSNFVEESFSSED+QKLQLISG+KP       ET + QP       
Sbjct: 108 DLCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGMKPRPDQAAFETRQFQPDPTRTNN 167

Query: 242 ------NPIFRPAEMSVPGKARTKRSRSAPCNWSSRLLHLS 138
                 NPIF P E+SVP KAR+KRSR+APCNW+SRLL LS
Sbjct: 168 NPNGNNNPIFNP-EVSVPAKARSKRSRAAPCNWTSRLLLLS 207


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  126 bits (317), Expect = 5e-27
 Identities = 77/192 (40%), Positives = 105/192 (54%), Gaps = 11/192 (5%)
 Frame = -3

Query: 680 YYNTQTTQFTPEK--QKPNENFVIEDLLNFSNEEEMIGGGDTFDSYSIXXXXXXXXNXXX 507
           YY+    +F+ EK  QKP ++F++EDLL+F N+++++  G  FD+ +             
Sbjct: 11  YYSAGADEFSQEKREQKPGDHFLVEDLLDFPNDDDIMTDG-FFDTVT----------GNS 59

Query: 506 XXXXXXXXXXCCNXXXXXXXXXXXXXXXXXXXXXXQLSDELCVPYDDIAELEWLSNFVEE 327
                      CN                      Q S ELCVP D++AELEWLSNFVEE
Sbjct: 60  TDSSTVTVVDSCNSSLSGNEPHFSGDVGCRNFTDAQFSGELCVPCDELAELEWLSNFVEE 119

Query: 326 SFSSEDMQKLQLISGIKPEISETHESQP---------NPIFRPAEMSVPGKARTKRSRSA 174
           SFSSED+ K+Q++SGIK  +  T   +P          PI +P  M+VPGKAR+KR RS 
Sbjct: 120 SFSSEDLHKIQVLSGIKAPLHTTESPEPQFQPETARSEPILQP-PMNVPGKARSKRPRSV 178

Query: 173 PCNWSSRLLHLS 138
           PC+WS+RLL LS
Sbjct: 179 PCDWSTRLLVLS 190


>ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 366

 Score =  115 bits (289), Expect = 9e-24
 Identities = 79/195 (40%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
 Frame = -3

Query: 659 QFTPEKQKPNENFVIEDLLNFSNEEEMIGGGDTFDSYSIXXXXXXXXNXXXXXXXXXXXX 480
           QFT +    +++F++EDLL+FSN++ +I    TFDS +                      
Sbjct: 12  QFTFDNNN-SDHFIVEDLLDFSNDDVVITDA-TFDSITTDSSTVTTTVHS---------- 59

Query: 479 XCCNXXXXXXXXXXXXXXXXXXXXXXQ-LSDELCVPYDDIAELEWLSNFVEESFSSEDMQ 303
             CN                         SD+LCVPYDDIAELEWLSNFVEESFSSED+ 
Sbjct: 60  --CNSSSFSGSDPNTVPDIGSRNLSDGHFSDDLCVPYDDIAELEWLSNFVEESFSSEDLH 117

Query: 302 KLQLISGIKP---EISETHE-----------------SQPNPIFRPAEMSVPGKARTKRS 183
           K+QLISG+     ++SE  E                 ++ +PIF  +E+SVP KAR+KRS
Sbjct: 118 KMQLISGMNAQNNDVSEAREFHYEPTTTRSGSHTPEPTRNSPIFN-SEVSVPAKARSKRS 176

Query: 182 RSAPCNWSSRLLHLS 138
           R  PCNW+SRLL LS
Sbjct: 177 RGPPCNWASRLLVLS 191


>ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
           gi|147811360|emb|CAN61228.1| hypothetical protein
           VITISV_004677 [Vitis vinifera]
          Length = 342

 Score =  114 bits (285), Expect = 3e-23
 Identities = 79/186 (42%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
 Frame = -3

Query: 662 TQFTPEKQ----KPN--ENFVIEDLLNFSNEEEMIGGGDTFDSYSIXXXXXXXXNXXXXX 501
           +QF  EK+    KP   ++F+IEDLL+FSN++ +I  G TFD+ +               
Sbjct: 17  SQFGTEKRISDTKPGGGDHFIIEDLLDFSNDDAVITDG-TFDTVT----------GTSTD 65

Query: 500 XXXXXXXXCCNXXXXXXXXXXXXXXXXXXXXXXQLSDELCVPYDDIAELEWLSNFVEESF 321
                    CN                        SD LCVPYDD+AELEWLSN VEESF
Sbjct: 66  SSTFTIVDSCNSVSGCEPQFAGDIGSRNYTDAHFSSD-LCVPYDDLAELEWLSNIVEESF 124

Query: 320 SSEDMQKLQLISGIK---PEISETHESQPNPIFRP--AEMSVPGKARTKRSRSAPCNWSS 156
           SSED++KLQLISG+K    E SET + QP     P  +    P KAR+KR+R+ PC W+S
Sbjct: 125 SSEDLEKLQLISGMKANTEEASETRDFQPENNQNPPLSLRDFPAKARSKRARAMPCKWTS 184

Query: 155 RLLHLS 138
           RLL LS
Sbjct: 185 RLLALS 190


>ref|XP_004162986.1| PREDICTED: GATA transcription factor 12-like [Cucumis sativus]
          Length = 338

 Score =  112 bits (280), Expect = 1e-22
 Identities = 60/95 (63%), Positives = 69/95 (72%), Gaps = 9/95 (9%)
 Frame = -3

Query: 395 SDELCVPYDDIAELEWLSNFVEESFSSEDMQKLQLISGIKPEISETHESQPNP------- 237
           S ELCVPYDD+AELEWLSNFVEESFSSEDMQKL+LISG+K +  E     P P       
Sbjct: 87  SSELCVPYDDLAELEWLSNFVEESFSSEDMQKLELISGVKVKSDEPPTQSPQPTATRSAA 146

Query: 236 -IFRPAEMSVPGKARTKRSRSAPCNW-SSRLLHLS 138
            IF+P  +SVP KAR+KRSR+ P NW +S LL LS
Sbjct: 147 AIFKPEIVSVPAKARSKRSRALPSNWNNSALLPLS 181


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