BLASTX nr result

ID: Coptis25_contig00031820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031820
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycin...    74   9e-12
ref|XP_002466609.1| hypothetical protein SORBIDRAFT_01g010980 [S...    71   1e-10
dbj|BAJ87553.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244...    70   2e-10

>ref|XP_002307589.1| predicted protein [Populus trichocarpa] gi|222857038|gb|EEE94585.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/55 (61%), Positives = 37/55 (67%)
 Frame = -1

Query: 165 MNQLSLEYESVWDTKPSWCQPWTITLTGVLMIAFSWXXXXXXXXXXXXXXXICAW 1
           +N LSLEY+SVWDTKPSWCQPWTITLTGVL+IA SW               IC W
Sbjct: 83  LNYLSLEYDSVWDTKPSWCQPWTITLTGVLVIAGSWLILHSVVVTTIVLLLICTW 137


>ref|NP_001234966.1| uncharacterized protein LOC100306689 [Glycine max]
           gi|255629283|gb|ACU14986.1| unknown [Glycine max]
          Length = 166

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/55 (60%), Positives = 36/55 (65%)
 Frame = -1

Query: 165 MNQLSLEYESVWDTKPSWCQPWTITLTGVLMIAFSWXXXXXXXXXXXXXXXICAW 1
           +N LSLEY+SVWDTKPSWCQPWTI LTGV +IA SW               ICAW
Sbjct: 75  LNHLSLEYDSVWDTKPSWCQPWTIALTGVSIIAISWLILHSVIITSLISSLICAW 129


>ref|XP_002466609.1| hypothetical protein SORBIDRAFT_01g010980 [Sorghum bicolor]
           gi|241920463|gb|EER93607.1| hypothetical protein
           SORBIDRAFT_01g010980 [Sorghum bicolor]
          Length = 179

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/55 (54%), Positives = 36/55 (65%)
 Frame = -1

Query: 165 MNQLSLEYESVWDTKPSWCQPWTITLTGVLMIAFSWXXXXXXXXXXXXXXXICAW 1
           +N LSLEY+SVWDTKP+WCQPWTI LTG +++A SW               ICAW
Sbjct: 88  LNYLSLEYDSVWDTKPAWCQPWTILLTGTVVVACSWVLIQSAVITAGVSFVICAW 142


>dbj|BAJ87553.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 171

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/55 (54%), Positives = 35/55 (63%)
 Frame = -1

Query: 165 MNQLSLEYESVWDTKPSWCQPWTITLTGVLMIAFSWXXXXXXXXXXXXXXXICAW 1
           +N LSLEY+SVWDTKP+WCQPWTI LTG + +A SW               ICAW
Sbjct: 81  LNYLSLEYDSVWDTKPAWCQPWTILLTGTVAVACSWVLIHSAVITGGVSFVICAW 135


>ref|XP_002272980.1| PREDICTED: uncharacterized protein LOC100244184 [Vitis vinifera]
           gi|296085207|emb|CBI28702.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 165 MNQLSLEYESVWDTKPSWCQPWTITLTGVLMIAFSW 58
           +N LSLEY+SVWDTKPSWCQPWTI LTGV +IA SW
Sbjct: 78  LNYLSLEYDSVWDTKPSWCQPWTIMLTGVSVIACSW 113


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