BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031814
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              221   5e-56
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   221   5e-56
emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]   221   5e-56
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   211   5e-53
ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/158 (67%), Positives = 121/158 (76%)
 Frame = -3

Query: 475 RKTGGLVVWRSGSTIILYRGASYEYPYFLTSVNQKNDTFNDKSFSESSMDHGVDGENPSS 296
           RKTGGLV+WRSGS IILYRGA+Y+YPYFL+  N  ND+ +D S      +   DG+   S
Sbjct: 251 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 310

Query: 295 SAGTDVKYFPPNHLNRAVRSSLVHGVGSPNKVRFQLPGEAQLAEEADCLLDGLGPRFTDW 116
           S   DVK   P   N+    SL+ GVG P +VRFQLPGEAQL EEAD LLDGLGPRFTDW
Sbjct: 311 SGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDW 370

Query: 115 WGYDPLPIDADLLPAIVPGYRKPFRLLPYGIKPKLTND 2
           WGYDPLPIDADLLPA+VPGYR+PFRLLPYG+KPKLTND
Sbjct: 371 WGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTND 408


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/158 (67%), Positives = 121/158 (76%)
 Frame = -3

Query: 475 RKTGGLVVWRSGSTIILYRGASYEYPYFLTSVNQKNDTFNDKSFSESSMDHGVDGENPSS 296
           RKTGGLV+WRSGS IILYRGA+Y+YPYFL+  N  ND+ +D S      +   DG+   S
Sbjct: 251 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 310

Query: 295 SAGTDVKYFPPNHLNRAVRSSLVHGVGSPNKVRFQLPGEAQLAEEADCLLDGLGPRFTDW 116
           S   DVK   P   N+    SL+ GVG P +VRFQLPGEAQL EEAD LLDGLGPRFTDW
Sbjct: 311 SGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDW 370

Query: 115 WGYDPLPIDADLLPAIVPGYRKPFRLLPYGIKPKLTND 2
           WGYDPLPIDADLLPA+VPGYR+PFRLLPYG+KPKLTND
Sbjct: 371 WGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTND 408


>emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
          Length = 1399

 Score =  221 bits (563), Expect = 5e-56
 Identities = 107/158 (67%), Positives = 121/158 (76%)
 Frame = -3

Query: 475 RKTGGLVVWRSGSTIILYRGASYEYPYFLTSVNQKNDTFNDKSFSESSMDHGVDGENPSS 296
           RKTGGLV+WRSGS IILYRGA+Y+YPYFL+  N  ND+ +D S      +   DG+   S
Sbjct: 443 RKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCS 502

Query: 295 SAGTDVKYFPPNHLNRAVRSSLVHGVGSPNKVRFQLPGEAQLAEEADCLLDGLGPRFTDW 116
           S   DVK   P   N+    SL+ GVG P +VRFQLPGEAQL EEAD LLDGLGPRFTDW
Sbjct: 503 SGKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDW 562

Query: 115 WGYDPLPIDADLLPAIVPGYRKPFRLLPYGIKPKLTND 2
           WGYDPLPIDADLLPA+VPGYR+PFRLLPYG+KPKLTND
Sbjct: 563 WGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTND 600


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
           gi|223543418|gb|EEF44949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1009

 Score =  211 bits (537), Expect = 5e-53
 Identities = 102/158 (64%), Positives = 123/158 (77%)
 Frame = -3

Query: 475 RKTGGLVVWRSGSTIILYRGASYEYPYFLTSVNQKNDTFNDKSFSESSMDHGVDGENPSS 296
           RKTGGLVVWR+GS I+LYRG +Y YPYFL+    +NDT  D +  ++   +  D     S
Sbjct: 223 RKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSID-AVQDTHKHNDSDKIKSCS 281

Query: 295 SAGTDVKYFPPNHLNRAVRSSLVHGVGSPNKVRFQLPGEAQLAEEADCLLDGLGPRFTDW 116
           S+   VK+  P+  N+AVR +L+ GVG PN+VRFQLPGEAQLAEE D LL+GLGPRF+DW
Sbjct: 282 SSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEGLGPRFSDW 341

Query: 115 WGYDPLPIDADLLPAIVPGYRKPFRLLPYGIKPKLTND 2
           WGY+PLP+DADLLPAIVPGY+KPFRLLPYGIKP LTND
Sbjct: 342 WGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTND 379


>ref|XP_002300024.1| predicted protein [Populus trichocarpa] gi|222847282|gb|EEE84829.1|
           predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  206 bits (524), Expect = 2e-51
 Identities = 102/158 (64%), Positives = 113/158 (71%)
 Frame = -3

Query: 475 RKTGGLVVWRSGSTIILYRGASYEYPYFLTSVNQKNDTFNDKSFSESSMDHGVDGENPSS 296
           RKTGGLVVWR GS I+LYRGA Y+YPYFL   +  N+T  D   +    D  VD E    
Sbjct: 227 RKTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSPDAVQNIDVDDKEVDEEGSVL 286

Query: 295 SAGTDVKYFPPNHLNRAVRSSLVHGVGSPNKVRFQLPGEAQLAEEADCLLDGLGPRFTDW 116
           SA        P   +  VR SLV GVGSPN+VRFQLPGEAQL EEAD LLDGLGPRF DW
Sbjct: 287 SAVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEADQLLDGLGPRFNDW 346

Query: 115 WGYDPLPIDADLLPAIVPGYRKPFRLLPYGIKPKLTND 2
           WGYDPLP+DADLLPA+V GYR+PFRLLPYG+ P LTND
Sbjct: 347 WGYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTND 384