BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031800
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827...   198   6e-49
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]           158   1e-48
gb|AAO23078.1| polyprotein [Glycine max]                              157   2e-47
gb|ACB28472.1| polyprotein [Ananas comosus]                           191   1e-46
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   186   2e-45

>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
            distachyon]
          Length = 1665

 Score =  198 bits (504), Expect = 6e-49
 Identities = 90/160 (56%), Positives = 118/160 (73%)
 Frame = -1

Query: 513  TKYSHLLCLTHPFTASTVAKLFMDNIYKLHGLPQSITSDRNKVFISSFWKTLFKSLGTEL 334
            TKY H + L HPFTA+TVA+LF+DN+Y+LHGLP+ I SDR+KVFISSFW+ LFK   T L
Sbjct: 1324 TKYGHFIPLKHPFTAATVAQLFLDNVYRLHGLPKIIISDRDKVFISSFWQQLFKLADTTL 1383

Query: 333  HLSTDYHPQTDGQTERSNACLESYLRCMIGHTPKSWVKWLPVAEWWFNTNHHTNLKMTPF 154
            +LS+ YHPQTDGQTER N CLE+YLRC++   P  W +WLP AE+W+NTN H+ L  +PF
Sbjct: 1384 NLSSSYHPQTDGQTERLNQCLETYLRCLVHAKPNRWARWLPQAEYWYNTNFHSALGRSPF 1443

Query: 153  TALYGYSPPHLALPTTITHTNAAVEDYLKQ*QTMVELIRE 34
              LYG  P +LA+  T   +N  +  +L++ Q M+ LIR+
Sbjct: 1444 EVLYGRKPRNLAMQNTTQLSNPDLAQWLQERQAMLPLIRQ 1483



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = -2

Query: 629  GLLQPLSIPEHAWQHISMDFIEGLPKSEGKEVILVVVDRLSIVTYYALLTH 477
            GLLQP  +P  AW  +SMDFIEGLP S   + ILVV+D+ +   ++  L H
Sbjct: 1284 GLLQPFPVPPEAWHTVSMDFIEGLPSSNHFDTILVVIDKFTKYGHFIPLKH 1334


>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
          Length = 1434

 Score =  158 bits (400), Expect(2) = 1e-48
 Identities = 66/121 (54%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
 Frame = -1

Query: 453  LFMDNIYKLHGLPQSITSDRNKVFISSFWKTLFKSLGTELHLSTDYHPQTDGQTERSNAC 274
            +FM+N+Y+LHG+P  I  DR+K+F S  ++ +FKS+GT L  ST YHPQ+DGQTER N C
Sbjct: 1150 IFMENVYRLHGMPLVIVFDRDKIFTSDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQC 1209

Query: 273  LESYLRCMIGHTPKSWVKWLPVAEWWFNTNHHTNLKMTPFTALYGYSPP---HLALPTTI 103
            +E+YLRCM+   P+ W KWLP AEWW+NT++HT+L++TP+ ALYG  PP     A+P  +
Sbjct: 1210 VEAYLRCMVFQEPRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVHPPQNGEQAIPGNV 1269

Query: 102  T 100
            T
Sbjct: 1270 T 1270



 Score = 60.8 bits (146), Expect(2) = 1e-48
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -2

Query: 629  GLLQPLSIPEHAWQHISMDFIEGLPKSEGKEVILVVVDRL 510
            GLL PL IPE AW HISMDFIEGLPKS+GK++ +  V RL
Sbjct: 1119 GLLDPLQIPEMAWTHISMDFIEGLPKSQGKDIFMENVYRL 1158


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  157 bits (398), Expect(2) = 2e-47
 Identities = 76/148 (51%), Positives = 100/148 (67%)
 Frame = -1

Query: 519  R*TKYSHLLCLTHPFTASTVAKLFMDNIYKLHGLPQSITSDRNKVFISSFWKTLFKSLGT 340
            R TKY+H + L   + +  VA+ FM +I KLHG+P+SI SDR++VF S+FW+ LFK  GT
Sbjct: 1169 RLTKYAHFIPLKADYNSKVVAEAFMSHIVKLHGIPRSIVSDRDRVFTSTFWQHLFKLQGT 1228

Query: 339  ELHLSTDYHPQTDGQTERSNACLESYLRCMIGHTPKSWVKWLPVAEWWFNTNHHTNLKMT 160
             L +S+ YHPQ+DGQ+E  N CLE YLRC     PK WVK LP AE+W+NT +H +L MT
Sbjct: 1229 TLAMSSAYHPQSDGQSEVLNKCLEMYLRCFTYEHPKGWVKALPWAEFWYNTAYHMSLGMT 1288

Query: 159  PFTALYGYSPPHLALPTTITHTNAAVED 76
            PF ALYG  PP      T+T    +++D
Sbjct: 1289 PFRALYGREPP------TLTRQACSIDD 1310



 Score = 57.8 bits (138), Expect(2) = 2e-47
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = -2

Query: 629  GLLQPLSIPEHAWQHISMDFIEGLPKSEGKEVILVVVDRLSIVTYY 492
            GLLQPL IP+  W+ ++MDFI GLP S G  VI+VV+DRL+   ++
Sbjct: 1131 GLLQPLPIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHF 1176


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  191 bits (485), Expect = 1e-46
 Identities = 79/131 (60%), Positives = 106/131 (80%)
 Frame = -1

Query: 519  R*TKYSHLLCLTHPFTASTVAKLFMDNIYKLHGLPQSITSDRNKVFISSFWKTLFKSLGT 340
            R +KY+H + L+HP+TAS+VA+LF+DNIYKLHG+P+SI SDR+ +F+S FW+ LFK L  
Sbjct: 803  RLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVSDRDTIFVSQFWQELFKRLQV 862

Query: 339  ELHLSTDYHPQTDGQTERSNACLESYLRCMIGHTPKSWVKWLPVAEWWFNTNHHTNLKMT 160
            +++LST YHPQ+DGQTE  N CLE+YLRCM G  PK W KWLP+AEWW+NT++H++ K T
Sbjct: 863  KVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSYHSSTKAT 922

Query: 159  PFTALYGYSPP 127
            P+  +YG  PP
Sbjct: 923  PYEVVYGQPPP 933



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 35/51 (68%), Positives = 40/51 (78%)
 Frame = -2

Query: 629 GLLQPLSIPEHAWQHISMDFIEGLPKSEGKEVILVVVDRLSIVTYYALLTH 477
           GLLQPL IPE  W  ISMDFIEGLP S+GKEVI+VVVDRLS   ++  L+H
Sbjct: 765 GLLQPLPIPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSH 815


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  186 bits (473), Expect = 2e-45
 Identities = 83/162 (51%), Positives = 112/162 (69%)
 Frame = -1

Query: 519  R*TKYSHLLCLTHPFTASTVAKLFMDNIYKLHGLPQSITSDRNKVFISSFWKTLFKSLGT 340
            R TKY+H + L+HP++   VA+ F+DNI+KLHG P +I SDR+++F S  W+ LFKS+  
Sbjct: 1014 RFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKV 1073

Query: 339  ELHLSTDYHPQTDGQTERSNACLESYLRCMIGHTPKSWVKWLPVAEWWFNTNHHTNLKMT 160
            +L  ST YHPQTDGQTER N C+ESYLRCM    PK WV WLP+AEWW+NT  HT LK++
Sbjct: 1074 QLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLS 1133

Query: 159  PFTALYGYSPPHLALPTTITHTNAAVEDYLKQ*QTMVELIRE 34
            PF ALYG+ PP +         +    D+L++ Q M+  ++E
Sbjct: 1134 PFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKE 1175



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = -2

Query: 629  GLLQPLSIPEHAWQHISMDFIEGLPKSEGKEVILVVVDRLSIVTYYALLTH 477
            GLL+PL IP+ AW HISMDFIEGLP S+GKEVI VVVDR +   +   L+H
Sbjct: 976  GLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSH 1026