BLASTX nr result

ID: Coptis25_contig00031794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031794
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic ...    61   8e-08

>ref|XP_002276795.1| PREDICTED: protein TIC 20-II, chloroplastic [Vitis vinifera]
           gi|147792791|emb|CAN71033.1| hypothetical protein
           VITISV_000355 [Vitis vinifera]
          Length = 218

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +2

Query: 5   LMIVPSLLHVVFPYGE-GFGFKIIQVVHSAFFVVVLSCFVYALGFCIFGKKPYFPKV 172
           L++VP L++ +F  G  G GF+++ + H+A FV V++CF+Y+LGFCI G+ PY P V
Sbjct: 154 LLVVPLLVNRIFNPGRAGVGFRLMVMGHNAIFVFVVACFLYSLGFCILGRTPYLPFV 210


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