BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031784
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94790.1| retrotransposon protein, putative, Ty3-gypsy subc...   127   1e-27
emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera]   124   1e-26
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]                120   9e-26
emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera]   119   2e-25
gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica G...   119   3e-25

>gb|ABA94790.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 193

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/108 (51%), Positives = 82/108 (75%)
 Frame = +1

Query: 1   VGPFRILKKVGSVAYRLELPEKFSAIHNVFHVSMLRKHLREEEEPCVIALDELALQQDAT 180
           +GPF I+++VG +AYRLELPE    +H+VFH+SMLRK+LR+ E    I ++ + + QD T
Sbjct: 74  IGPFLIVERVGILAYRLELPESMKGVHDVFHISMLRKYLRDPEHH--ITVESVTIGQDLT 131

Query: 181 YEEKPIRIIDRKEQVLRNRVISLVKVLWNHHDEREASWELDADVRERY 324
           +E +P+RI++  E+VLR+R I  VKVLW H  EREA+WEL++ +RE+Y
Sbjct: 132 FESRPVRILEESERVLRHRTIKYVKVLWTHQTEREATWELESQMREKY 179


>emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera]
          Length = 1043

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/108 (54%), Positives = 81/108 (75%)
 Frame = +1

Query: 1    VGPFRILKKVGSVAYRLELPEKFSAIHNVFHVSMLRKHLREEEEPCVIALDELALQQDAT 180
            VGPF IL+K+G VAY+L LP + S IH+VFHVSMLRK+  E +   V+   +L LQ+D T
Sbjct: 929  VGPFEILQKIGEVAYKLALPPQLSGIHDVFHVSMLRKY--EPDTTHVLDWQDLNLQEDVT 986

Query: 181  YEEKPIRIIDRKEQVLRNRVISLVKVLWNHHDEREASWELDADVRERY 324
            YEE P +I+D+KE+VLR ++I LVKV W+HH    A+WEL++D+R +Y
Sbjct: 987  YEEGPRQILDKKEKVLRTKIIPLVKVSWDHHGVEGATWELESDMRNKY 1034


>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
          Length = 1484

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/108 (52%), Positives = 80/108 (74%)
 Frame = +1

Query: 1    VGPFRILKKVGSVAYRLELPEKFSAIHNVFHVSMLRKHLREEEEPCVIALDELALQQDAT 180
            VGPF++L++ G VAYRLELPE  S +H+VFHVS L+K LR  EE   + L+EL+++ D T
Sbjct: 1374 VGPFKVLERRGEVAYRLELPESLSGVHDVFHVSQLKKCLRVPEEQ--LPLEELSVKGDLT 1431

Query: 181  YEEKPIRIIDRKEQVLRNRVISLVKVLWNHHDEREASWELDADVRERY 324
            YEE P++I++  E+V R+RVI + KV WN H E EA+WE + D+R+ Y
Sbjct: 1432 YEEYPVKILETAERVTRSRVIRMCKVQWNRHSEAEATWEREDDLRKSY 1479


>emb|CAN68184.1| hypothetical protein VITISV_007862 [Vitis vinifera]
          Length = 506

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/108 (52%), Positives = 79/108 (73%)
 Frame = +1

Query: 1   VGPFRILKKVGSVAYRLELPEKFSAIHNVFHVSMLRKHLREEEEPCVIALDELALQQDAT 180
           +GPF I++K+G VAY+L L  + S IH+VFHVSML+K+  E +   V+   +L LQ+D T
Sbjct: 355 IGPFEIIQKIGDVAYKLALLPQLSGIHDVFHVSMLQKY--EPDTTHVLDWQDLNLQEDVT 412

Query: 181 YEEKPIRIIDRKEQVLRNRVISLVKVLWNHHDEREASWELDADVRERY 324
           YEE P  I+D+KEQVLR + I LVKVLW+HH    A+WEL++D+R +Y
Sbjct: 413 YEEGPREILDKKEQVLRTKTIPLVKVLWDHHGVEGATWELESDMRNKY 460


>gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica Group]
          Length = 552

 Score =  119 bits (297), Expect = 3e-25
 Identities = 55/108 (50%), Positives = 80/108 (74%)
 Frame = +1

Query: 1   VGPFRILKKVGSVAYRLELPEKFSAIHNVFHVSMLRKHLREEEEPCVIALDELALQQDAT 180
           +GPF I  +VGS+AYRL+LPE  + +H+VFHVSMLRK+LR+ E    I L+ + ++QD T
Sbjct: 436 IGPFVITARVGSLAYRLQLPESMNGVHDVFHVSMLRKYLRDPEHK--IDLEPIMVEQDLT 493

Query: 181 YEEKPIRIIDRKEQVLRNRVISLVKVLWNHHDEREASWELDADVRERY 324
            E +P+RI D  E+V+R R I  VKVLW +  EREA+WEL+ +++++Y
Sbjct: 494 IECRPVRIFDWSERVMRRRTIKYVKVLWTNQSEREATWELEEEMKKKY 541