BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031781
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             78   6e-13
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   77   1e-12
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    71   8e-11
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    71   8e-11
dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]         71   1e-10

>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 33/60 (55%), Positives = 46/60 (76%)
 Frame = -1

Query: 248 RGKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFADDLIAF 69
           +GKRG+RQGDP+SPYLF++ ME+ S  + Q  + G  QLH +C +P++THL FADDL+ F
Sbjct: 15  KGKRGLRQGDPLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTHLIFADDLVIF 74


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/64 (51%), Positives = 47/64 (73%)
 Frame = -1

Query: 248 RGKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFADDLIAF 69
           +G+RG+RQGDP+SPYLF++ ME+ S ++ +   E    LH +C  PVITHL+FADD++ F
Sbjct: 98  KGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIF 157

Query: 68  MHGE 57
             GE
Sbjct: 158 TSGE 161


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = -1

Query: 245 GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFADDLIAFM 66
           GK+GIRQGDPMS +LFVLVM++ +  +     EG   LH +C  P+ITHLSFADD++ F 
Sbjct: 193 GKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFC 252

Query: 65  HG 60
            G
Sbjct: 253 DG 254


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/62 (54%), Positives = 44/62 (70%)
 Frame = -1

Query: 245 GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFADDLIAFM 66
           GK+GIRQGDPMS +LFVLVM++ +  +     EG   LH +C  P+ITHLSFADD++ F 
Sbjct: 193 GKKGIRQGDPMSSHLFVLVMDILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFC 252

Query: 65  HG 60
            G
Sbjct: 253 DG 254


>dbj|BAB09269.1| unnamed protein product [Arabidopsis thaliana]
          Length = 422

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/59 (52%), Positives = 44/59 (74%)
 Frame = -1

Query: 245 GKRGIRQGDPMSPYLFVLVMELFSDLMLQQVNEGHCQLHYRCKDPVITHLSFADDLIAF 69
           G++G+RQGDP+SPYLF++VM++ S+L+ Q   EG  +LH  C  P +THL FAD L+ F
Sbjct: 42  GQKGLRQGDPISPYLFIIVMKVLSNLLSQATYEGKFRLHPLCDSPRLTHLLFADALLIF 100