BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031764
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putativ...    73   2e-11
ref|XP_002322017.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|NP_200125.1| cyclic nucleotide-gated ion channel 1 [Arabidop...    70   1e-10
ref|XP_004160370.1| PREDICTED: cyclic nucleotide-gated ion chann...    70   2e-10

>ref|XP_002513573.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223547481|gb|EEF48976.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 838

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
 Frame = -1

Query: 278 VLTLIMPRMSGLIDVRKTNSLHYVVLLQYIPRSLRVYLLYKEV-RIMNTMIISPWAGAIF 102
           V+ +I+P+M G   +   N L +VVL QYIPR +R+Y LYKEV R    +  + WAGA F
Sbjct: 201 VILIIIPKMKGSRSLNTKNLLKFVVLFQYIPRFMRIYPLYKEVTRTSGILTETAWAGAAF 260

Query: 101 NFYLYVLASHVSLSVTLLPVFIYLI 27
           N +LY+LASHV      L  F YL+
Sbjct: 261 NLFLYMLASHV------LGAFWYLV 279


>ref|XP_002322017.1| predicted protein [Populus trichocarpa] gi|222869013|gb|EEF06144.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/70 (45%), Positives = 47/70 (67%)
 Frame = -1

Query: 278 VLTLIMPRMSGLIDVRKTNSLHYVVLLQYIPRSLRVYLLYKEVRIMNTMIISPWAGAIFN 99
           V+ +I+P+M G   +   N L +VV+ QY+PR +R+Y LYKEV     +  + WAGA FN
Sbjct: 197 VILIIIPKMGGSSYLNTKNLLKFVVIFQYVPRFVRIYPLYKEVTTSGILTETAWAGAAFN 256

Query: 98  FYLYVLASHV 69
            +LY+LASH+
Sbjct: 257 LFLYMLASHI 266


>ref|XP_002317760.1| predicted protein [Populus trichocarpa] gi|222858433|gb|EEE95980.1|
           predicted protein [Populus trichocarpa]
          Length = 709

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/70 (45%), Positives = 48/70 (68%)
 Frame = -1

Query: 278 VLTLIMPRMSGLIDVRKTNSLHYVVLLQYIPRSLRVYLLYKEVRIMNTMIISPWAGAIFN 99
           V+ +I+ +M+G  ++   N L +VV+ QY+PR +R+Y LYKEV     +  + WAGA FN
Sbjct: 197 VILIIIRKMAGSRNLNTKNLLKFVVIFQYVPRFMRIYPLYKEVTTSGILTETAWAGAAFN 256

Query: 98  FYLYVLASHV 69
            +LY+LASHV
Sbjct: 257 LFLYMLASHV 266


>ref|NP_200125.1| cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana]
           gi|38502855|sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic
           nucleotide-gated ion channel 1; Short=AtCNGC1; AltName:
           Full=Cyclic nucleotide- and calmodulin-regulated ion
           channel 1 gi|13877753|gb|AAK43954.1|AF370139_1 putative
           cyclic nucleotide-regulated ion channel protein
           [Arabidopsis thaliana] gi|3096947|emb|CAA76178.1|
           putative cyclic nucleotide-regulated ion channel
           [Arabidopsis thaliana] gi|9757994|dbj|BAB08416.1| cyclic
           nucleotide-regulated ion channel [Arabidopsis thaliana]
           gi|24030485|gb|AAN41391.1| putative cyclic
           nucleotide-regulated ion channel protein [Arabidopsis
           thaliana] gi|332008928|gb|AED96311.1| cyclic
           nucleotide-gated ion channel 1 [Arabidopsis thaliana]
          Length = 716

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = -1

Query: 329 YILRLLSVELNVHFQYQVLTLIMPRMSGLIDVRKTNSLHYVVLLQYIPRSLRVYLLYKEV 150
           +I+ +L+V   +     V+ +I+P M G   +   N L ++V  QYIPR +R+Y LYKEV
Sbjct: 188 FIIDILAV---LPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEV 244

Query: 149 -RIMNTMIISPWAGAIFNFYLYVLASHV 69
            R    +  + WAGA FN +LY+LASHV
Sbjct: 245 TRTSGILTETAWAGAAFNLFLYMLASHV 272


>ref|XP_004160370.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Cucumis
           sativus]
          Length = 714

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/70 (45%), Positives = 46/70 (65%)
 Frame = -1

Query: 278 VLTLIMPRMSGLIDVRKTNSLHYVVLLQYIPRSLRVYLLYKEVRIMNTMIISPWAGAIFN 99
           V+ +I+P M G   +   + L +VV  QY+PR +R+Y LYKEV   + +  + WAGA FN
Sbjct: 201 VILIIIPNMKGSRSLNTKDLLKFVVFFQYVPRFIRIYPLYKEVTRTSVLTETAWAGAAFN 260

Query: 98  FYLYVLASHV 69
            +LY+LASHV
Sbjct: 261 LFLYMLASHV 270