BLASTX nr result

ID: Coptis25_contig00031756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031756
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    66   3e-09
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]    63   2e-08
emb|CAN66203.1| hypothetical protein VITISV_015760 [Vitis vinifera]    62   6e-08
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               61   1e-07
emb|CAN71234.1| hypothetical protein VITISV_019908 [Vitis vinifera]    57   1e-06

>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/58 (55%), Positives = 44/58 (75%)
 Frame = +1

Query: 1    HYVRELVTNKLLDVQYLNTKDQIADVLTKALSSQRFHFLTNKLSVLSNPFSLREGIEQ 174
            H+VRE V  K LDV++L +KDQ+ D+LTKALS+QRF  L +KL+VLS P  LR  +++
Sbjct: 1067 HFVRERVLPKTLDVRFLPSKDQVVDILTKALSTQRFLHLRSKLTVLSRPMCLRGDVKK 1124


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/58 (51%), Positives = 44/58 (75%)
 Frame = +1

Query: 1   HYVRELVTNKLLDVQYLNTKDQIADVLTKALSSQRFHFLTNKLSVLSNPFSLREGIEQ 174
           H+VRE V  K LDV++L ++DQ+AD+LTK+LS+Q F  L +KL+VLS P  LR  +++
Sbjct: 273 HFVRERVLQKTLDVRFLPSEDQVADILTKSLSTQHFLHLRSKLTVLSRPVCLRGDVKK 330


>emb|CAN66203.1| hypothetical protein VITISV_015760 [Vitis vinifera]
          Length = 576

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = +1

Query: 1   HYVRELVTNKLLDVQYLNTKDQIADVLTKALSSQRFHFLTNKLSVLSNPFSLREGIEQKN 180
           H++ E V  K LDV+Y++T+DQI DVLTK LS  R   L NKL+V  +PFSLR  +E   
Sbjct: 421 HFIHEKVLAKELDVRYISTEDQIVDVLTKPLSEARVEQLLNKLTVALSPFSLRGVLELMK 480

Query: 181 E 183
           E
Sbjct: 481 E 481


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/59 (50%), Positives = 39/59 (66%)
 Frame = +1

Query: 1    HYVRELVTNKLLDVQYLNTKDQIADVLTKALSSQRFHFLTNKLSVLSNPFSLREGIEQK 177
            HYVR+ V  + L V Y++T DQ AD+ TK LS+QRF FL +KL V + P SLR    Q+
Sbjct: 1321 HYVRDKVVRQELAVSYVSTADQTADIFTKGLSTQRFQFLASKLPVRARPLSLRGNDNQE 1379


>emb|CAN71234.1| hypothetical protein VITISV_019908 [Vitis vinifera]
          Length = 574

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/59 (45%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
 Frame = +1

Query: 1   HYVRELVTNKLLDVQYLNTKDQIADVLTKALSSQRFHFLTNKLSVLSNPFS-LREGIEQ 174
           H++ + V  K L+++Y+ TKDQ AD+ TK+LS  +FHFL  KL+++ +P S LRE +E+
Sbjct: 181 HFIGDKVIAKELEIKYVPTKDQTADIFTKSLSISQFHFLKGKLAIVQSPQSRLREHLEE 239


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