BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031751
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   111   1e-41
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...   110   5e-41
ref|XP_003543798.1| PREDICTED: reticulon-like protein B16-like [...   101   2e-39
gb|AFK38607.1| unknown [Lotus japonicus]                              100   8e-39
ref|XP_003618508.1| Reticulon-like protein B16 [Medicago truncat...    98   2e-38

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  111 bits (278), Expect(2) = 1e-41
 Identities = 51/71 (71%), Positives = 61/71 (85%)
 Frame = +1

Query: 298 LLSVTGSFFSFFTLAYIGIIMSITIPALYGKYEEQVDRYAGLVHQKFSKHYKIVDENIIS 477
           LLSV GS FSFFTLAYIG I+SIT+PALY KYEE VD+Y G++H+KFSKHYK+VDEN+I 
Sbjct: 156 LLSVVGSSFSFFTLAYIGTIISITVPALYSKYEEHVDKYFGIIHRKFSKHYKLVDENVIR 215

Query: 478 RLPRSSSKDKD 510
           R+P   SKDK+
Sbjct: 216 RIPPGLSKDKE 226



 Score = 84.0 bits (206), Expect(2) = 1e-41
 Identities = 43/65 (66%), Positives = 46/65 (70%)
 Frame = +2

Query: 2   NLATLRNRQXXXXXXXXXXXXMVNSAAASFRVKINYTLLMAHDITIGKDFRLFFKVVVCL 181
           N A  RN+Q            MVNS A SFRVKINY LLMAHDIT+GKDFRLFFKVV+ L
Sbjct: 95  NYAAFRNKQLKSLPELELSEEMVNSVAGSFRVKINYLLLMAHDITLGKDFRLFFKVVLGL 154

Query: 182 WLLSV 196
           WLLSV
Sbjct: 155 WLLSV 159


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  110 bits (276), Expect(2) = 5e-41
 Identities = 51/71 (71%), Positives = 62/71 (87%)
 Frame = +1

Query: 298 LLSVTGSFFSFFTLAYIGIIMSITIPALYGKYEEQVDRYAGLVHQKFSKHYKIVDENIIS 477
           LLS  GS+FSFFTLAYIG I+SITIPALY +YEE+VDR  G++H+K S HYKIVDE++IS
Sbjct: 173 LLSTVGSYFSFFTLAYIGTILSITIPALYSRYEERVDRCCGIIHRKLSHHYKIVDESVIS 232

Query: 478 RLPRSSSKDKD 510
           R+P+S SKDKD
Sbjct: 233 RIPQSLSKDKD 243



 Score = 82.4 bits (202), Expect(2) = 5e-41
 Identities = 43/64 (67%), Positives = 47/64 (73%)
 Frame = +2

Query: 2   NLATLRNRQXXXXXXXXXXXXMVNSAAASFRVKINYTLLMAHDITIGKDFRLFFKVVVCL 181
           N+A + N+Q            MVNSAAASFRVKIN  LLMAHDIT+GKDFRLFFKVVV L
Sbjct: 112 NIADMINKQLQSLPELVLSEEMVNSAAASFRVKINNVLLMAHDITLGKDFRLFFKVVVFL 171

Query: 182 WLLS 193
           WLLS
Sbjct: 172 WLLS 175


>ref|XP_003543798.1| PREDICTED: reticulon-like protein B16-like [Glycine max]
          Length = 198

 Score =  101 bits (251), Expect(2) = 2e-39
 Identities = 48/71 (67%), Positives = 58/71 (81%)
 Frame = +1

Query: 298 LLSVTGSFFSFFTLAYIGIIMSITIPALYGKYEEQVDRYAGLVHQKFSKHYKIVDENIIS 477
           LLSV GS FSFFTLAYIG +M ITIPALY KY   VD+  GL+H +FSKHY+IVDE++ +
Sbjct: 127 LLSVIGSVFSFFTLAYIGTLMMITIPALYHKYGGYVDKCCGLIHSQFSKHYRIVDESVFN 186

Query: 478 RLPRSSSKDKD 510
           RLPR+ SKDK+
Sbjct: 187 RLPRNISKDKE 197



 Score = 86.7 bits (213), Expect(2) = 2e-39
 Identities = 43/65 (66%), Positives = 49/65 (75%)
 Frame = +2

Query: 2   NLATLRNRQXXXXXXXXXXXXMVNSAAASFRVKINYTLLMAHDITIGKDFRLFFKVVVCL 181
           N A+LRN+Q            MVN+ AASFRVKIN  LL+AHDITIGKDFR+FFKVV+CL
Sbjct: 66  NYASLRNKQPPTLPELVVSEEMVNNVAASFRVKINNMLLIAHDITIGKDFRIFFKVVICL 125

Query: 182 WLLSV 196
           WLLSV
Sbjct: 126 WLLSV 130


>gb|AFK38607.1| unknown [Lotus japonicus]
          Length = 198

 Score = 99.8 bits (247), Expect(2) = 8e-39
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = +1

Query: 298 LLSVTGSFFSFFTLAYIGIIMSITIPALYGKYEEQVDRYAGLVHQKFSKHYKIVDENIIS 477
           LLSV GS+FSFFTLAYIG +M ITIPALY KY   VD+  G++H +FSKHY+IVDE++ +
Sbjct: 127 LLSVIGSYFSFFTLAYIGSLMMITIPALYRKYGNYVDKCCGILHHQFSKHYRIVDESVFN 186

Query: 478 RLPRSSSKDKD 510
           RLP + SKDK+
Sbjct: 187 RLPHNVSKDKE 197



 Score = 86.3 bits (212), Expect(2) = 8e-39
 Identities = 44/65 (67%), Positives = 47/65 (72%)
 Frame = +2

Query: 2   NLATLRNRQXXXXXXXXXXXXMVNSAAASFRVKINYTLLMAHDITIGKDFRLFFKVVVCL 181
           N A  RNRQ            MVN+ AASFRVKIN  LL+AHDITIGKDFR+FFKVVVCL
Sbjct: 66  NYAAFRNRQAPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITIGKDFRVFFKVVVCL 125

Query: 182 WLLSV 196
           WLLSV
Sbjct: 126 WLLSV 130


>ref|XP_003618508.1| Reticulon-like protein B16 [Medicago truncatula]
           gi|355493523|gb|AES74726.1| Reticulon-like protein B16
           [Medicago truncatula]
          Length = 198

 Score = 97.8 bits (242), Expect(2) = 2e-38
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = +1

Query: 298 LLSVTGSFFSFFTLAYIGIIMSITIPALYGKYEEQVDRYAGLVHQKFSKHYKIVDENIIS 477
           LLSV GS FSFFTLAYIG +M   +PALY KY   VD+  G++H +FSKHYKIVDEN+++
Sbjct: 127 LLSVIGSIFSFFTLAYIGTLMMFIVPALYRKYGTYVDKCFGVIHHQFSKHYKIVDENVLN 186

Query: 478 RLPRSSSKDKD 510
           RLPR+  KDK+
Sbjct: 187 RLPRNIPKDKE 197



 Score = 86.7 bits (213), Expect(2) = 2e-38
 Identities = 43/65 (66%), Positives = 48/65 (73%)
 Frame = +2

Query: 2   NLATLRNRQXXXXXXXXXXXXMVNSAAASFRVKINYTLLMAHDITIGKDFRLFFKVVVCL 181
           N A LRN+Q            MVN+ AASFRVKIN  LL+AHDIT+GKDFR+FFKVVVCL
Sbjct: 66  NYAALRNKQPPTLPELVVSEEMVNNVAASFRVKINNVLLIAHDITVGKDFRIFFKVVVCL 125

Query: 182 WLLSV 196
           WLLSV
Sbjct: 126 WLLSV 130