BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00031721
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat...   164   7e-39
ref|XP_002518803.1| pentatricopeptide repeat-containing protein,...   158   4e-37
ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   152   4e-35
ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat...   152   4e-35

>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/127 (66%), Positives = 100/127 (78%)
 Frame = -3

Query: 381 LVHILFRARMYFDAQEVLKKMISSRQVLSNGLIFFDVLWLTKDFCHSGYGVFDALFGVLI 202
           LVHILF AR Y DA  VLK++I  R+VL +  +F D+LW T++ C  G+GVFDALF  LI
Sbjct: 138 LVHILFCARFYSDANAVLKELICLRRVLPSWDVF-DLLWATRNVCVPGFGVFDALFSALI 196

Query: 201 ELGLLEEANECFLRMRKFKVFVKPRSCNVLLHRLSKSGKTDLSRKFFESMLNAKITPSVF 22
           ELG+LEEA+ECFL+MRKF+VF KPRSCN LLHRLSK G+ DLSRKFF+ M  A I  SVF
Sbjct: 197 ELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVF 256

Query: 21  TYNIMID 1
           TYNIMID
Sbjct: 257 TYNIMID 263


>ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542184|gb|EEF43728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 775

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/126 (63%), Positives = 96/126 (76%)
 Frame = -3

Query: 381 LVHILFRARMYFDAQEVLKKMISSRQVLSNGLIFFDVLWLTKDFCHSGYGVFDALFGVLI 202
           LVHILF ARMYFDA   LK++ISSR++L  G   F+VLW T++ C  G+GVFDALF V I
Sbjct: 135 LVHILFYARMYFDANFFLKELISSRRILP-GFDVFEVLWSTRNVCVPGFGVFDALFSVFI 193

Query: 201 ELGLLEEANECFLRMRKFKVFVKPRSCNVLLHRLSKSGKTDLSRKFFESMLNAKITPSVF 22
           ELG+LEEA +CF RM +F+VF K RSCN  L+RL+K+GK DLS KFF  M+ A I  SVF
Sbjct: 194 ELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVF 253

Query: 21  TYNIMI 4
           TYNIMI
Sbjct: 254 TYNIMI 259


>ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|222864866|gb|EEF01997.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/126 (61%), Positives = 94/126 (74%)
 Frame = -3

Query: 381 LVHILFRARMYFDAQEVLKKMISSRQVLSNGLIFFDVLWLTKDFCHSGYGVFDALFGVLI 202
           LVHILF ARMYF A  +LK+++ S  VL  G   F++LW T++ C  G+GVFDALF VL+
Sbjct: 15  LVHILFYARMYFHANNILKELVLSSWVLP-GSDVFEILWTTRNVCVPGFGVFDALFSVLV 73

Query: 201 ELGLLEEANECFLRMRKFKVFVKPRSCNVLLHRLSKSGKTDLSRKFFESMLNAKITPSVF 22
           ELG+LE A +CFLRM KF+V  K RSCN  LHRLSK+G+ DLSR FF  M+ A I P+VF
Sbjct: 74  ELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVF 133

Query: 21  TYNIMI 4
           TYNIMI
Sbjct: 134 TYNIMI 139


>ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
 Frame = -3

Query: 381 LVHILFRARMYFDAQEVLKKMISSRQVLSNGLI--FFDVLWLTKDFCHSGYGVFDALFGV 208
           +VH++FRARMY DA + +K++I + ++     +   FD+LW T++ C SG GVFD LF V
Sbjct: 110 IVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSV 169

Query: 207 LIELGLLEEANECFLRMRKFKVFVKPRSCNVLLHRLSKSGKTDLSRKFFESMLNAKITPS 28
            +ELGLLEEANECF RMR F+   K RSCN LLHRLSKSG   L RKFF  M+ A I PS
Sbjct: 170 FVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPS 229

Query: 27  VFTYNIMID 1
           VFTYN+MID
Sbjct: 230 VFTYNVMID 238


>ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  152 bits (383), Expect = 4e-35
 Identities = 75/129 (58%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
 Frame = -3

Query: 381 LVHILFRARMYFDAQEVLKKMISSRQVLSNGLI--FFDVLWLTKDFCHSGYGVFDALFGV 208
           +VH++FRARMY DA + +K++I + ++     +   FD+LW T++ C SG GVFD LF V
Sbjct: 169 IVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSV 228

Query: 207 LIELGLLEEANECFLRMRKFKVFVKPRSCNVLLHRLSKSGKTDLSRKFFESMLNAKITPS 28
            +ELGLLEEANECF RMR F+   K RSCN LLHRLSKSG   L RKFF  M+ A I PS
Sbjct: 229 FVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPS 288

Query: 27  VFTYNIMID 1
           VFTYN+MID
Sbjct: 289 VFTYNVMID 297